Gene : Thecc1EG029785 T. cacao v1.1

Defline:  (1 of 1) PTHR33873//PTHR33873:SF1 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR VOZ1 Genomic Order:  1750
Name:  ? Thecc1EG029785 Secondary Identifier:  ? PAC:27438714

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029785 0.5kb upstream 0.5kb upstream 4857 true scaffold_6: 24300809-24305665 Theobroma cacao
Thecc1EG029785 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24305166-24305665 Theobroma cacao
Thecc1EG029785 0.5kb downstream 0.5kb downstream 4857 true scaffold_6: 24300309-24305165 Theobroma cacao
Thecc1EG029785 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24300309-24300808 Theobroma cacao
Thecc1EG029785 1.0kb upstream 1.0kb upstream 5357 true scaffold_6: 24300809-24306165 Theobroma cacao
Thecc1EG029785 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24305166-24306165 Theobroma cacao
Thecc1EG029785 1.0kb downstream 1.0kb downstream 5357 true scaffold_6: 24299809-24305165 Theobroma cacao
Thecc1EG029785 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24299809-24300808 Theobroma cacao
Thecc1EG029785 2.0kb upstream 2.0kb upstream 6357 true scaffold_6: 24300809-24307165 Theobroma cacao
Thecc1EG029785 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24305166-24307165 Theobroma cacao
Thecc1EG029785 2.0kb downstream 2.0kb downstream 6357 true scaffold_6: 24298809-24305165 Theobroma cacao
Thecc1EG029785 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24298809-24300808 Theobroma cacao
Thecc1EG029785 5.0kb upstream 5.0kb upstream 9357 true scaffold_6: 24300809-24310165 Theobroma cacao
Thecc1EG029785 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24305166-24310165 Theobroma cacao
Thecc1EG029785 5.0kb downstream 5.0kb downstream 9357 true scaffold_6: 24295809-24305165 Theobroma cacao
Thecc1EG029785 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24295809-24300808 Theobroma cacao
Thecc1EG029785 10.0kb upstream 10.0kb upstream 14357 true scaffold_6: 24300809-24315165 Theobroma cacao
Thecc1EG029785 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24305166-24315165 Theobroma cacao
Thecc1EG029785 10.0kb downstream 10.0kb downstream 14357 true scaffold_6: 24290809-24305165 Theobroma cacao
Thecc1EG029785 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24290809-24300808 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827953 5264 Brassicales-Malvales View MSA
124343082 5266 SBM View MSA
124247541 5268 Malvidae View MSA
124066720 5270 Rosid View MSA
123737932 5271 Pentapetalae View MSA
122797844 5272 Eudicot View MSA
122043421 5273 Angiosperm View MSA
121348934 5274 Embryophyte View MSA
123381085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain