Gene : Thecc1EG029778 T. cacao v1.1

Defline:  (1 of 2) K07904//K07976 - Ras-related protein Rab-11A (RAB11A) // Rab family, other (RAB) Genomic Order:  1743
Name:  ? Thecc1EG029778 Secondary Identifier:  ? PAC:27440917

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029778 0.5kb upstream 0.5kb upstream 3222 true scaffold_6: 24283496-24286717 Theobroma cacao
Thecc1EG029778 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24283496-24283995 Theobroma cacao
Thecc1EG029778 0.5kb downstream 0.5kb downstream 3222 true scaffold_6: 24283996-24287217 Theobroma cacao
Thecc1EG029778 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24286718-24287217 Theobroma cacao
Thecc1EG029778 1.0kb upstream 1.0kb upstream 3722 true scaffold_6: 24282996-24286717 Theobroma cacao
Thecc1EG029778 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24282996-24283995 Theobroma cacao
Thecc1EG029778 1.0kb downstream 1.0kb downstream 3722 true scaffold_6: 24283996-24287717 Theobroma cacao
Thecc1EG029778 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24286718-24287717 Theobroma cacao
Thecc1EG029778 2.0kb upstream 2.0kb upstream 4722 true scaffold_6: 24281996-24286717 Theobroma cacao
Thecc1EG029778 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24281996-24283995 Theobroma cacao
Thecc1EG029778 2.0kb downstream 2.0kb downstream 4722 true scaffold_6: 24283996-24288717 Theobroma cacao
Thecc1EG029778 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24286718-24288717 Theobroma cacao
Thecc1EG029778 5.0kb upstream 5.0kb upstream 7722 true scaffold_6: 24278996-24286717 Theobroma cacao
Thecc1EG029778 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24278996-24283995 Theobroma cacao
Thecc1EG029778 5.0kb downstream 5.0kb downstream 7722 true scaffold_6: 24283996-24291717 Theobroma cacao
Thecc1EG029778 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24286718-24291717 Theobroma cacao
Thecc1EG029778 10.0kb upstream 10.0kb upstream 12722 true scaffold_6: 24273996-24286717 Theobroma cacao
Thecc1EG029778 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24273996-24283995 Theobroma cacao
Thecc1EG029778 10.0kb downstream 10.0kb downstream 12722 true scaffold_6: 24283996-24296717 Theobroma cacao
Thecc1EG029778 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24286718-24296717 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839214 5264 Brassicales-Malvales View MSA
124322582 5266 SBM View MSA
124254365 5268 Malvidae View MSA
124074374 5270 Rosid View MSA
123750734 5271 Pentapetalae View MSA
122796076 5272 Eudicot View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain