Gene : Thecc1EG029760 T. cacao v1.1
Defline:  Uncharacterized protein (16%U) Genomic Order:  1726
Name:  ? Thecc1EG029760 Secondary Identifier:  ? PAC:27440030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029760 0.5kb upstream 0.5kb upstream 3388 true scaffold_6: 24198521-24201908 Theobroma cacao
Thecc1EG029760 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24198521-24199020 Theobroma cacao
Thecc1EG029760 0.5kb downstream 0.5kb downstream 3388 true scaffold_6: 24199021-24202408 Theobroma cacao
Thecc1EG029760 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24201909-24202408 Theobroma cacao
Thecc1EG029760 1.0kb upstream 1.0kb upstream 3888 true scaffold_6: 24198021-24201908 Theobroma cacao
Thecc1EG029760 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24198021-24199020 Theobroma cacao
Thecc1EG029760 1.0kb downstream 1.0kb downstream 3888 true scaffold_6: 24199021-24202908 Theobroma cacao
Thecc1EG029760 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24201909-24202908 Theobroma cacao
Thecc1EG029760 2.0kb upstream 2.0kb upstream 4888 true scaffold_6: 24197021-24201908 Theobroma cacao
Thecc1EG029760 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24197021-24199020 Theobroma cacao
Thecc1EG029760 2.0kb downstream 2.0kb downstream 4888 true scaffold_6: 24199021-24203908 Theobroma cacao
Thecc1EG029760 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24201909-24203908 Theobroma cacao
Thecc1EG029760 5.0kb upstream 5.0kb upstream 7888 true scaffold_6: 24194021-24201908 Theobroma cacao
Thecc1EG029760 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24194021-24199020 Theobroma cacao
Thecc1EG029760 5.0kb downstream 5.0kb downstream 7888 true scaffold_6: 24199021-24206908 Theobroma cacao
Thecc1EG029760 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24201909-24206908 Theobroma cacao
Thecc1EG029760 10.0kb upstream 10.0kb upstream 12888 true scaffold_6: 24189021-24201908 Theobroma cacao
Thecc1EG029760 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24189021-24199020 Theobroma cacao
Thecc1EG029760 10.0kb downstream 10.0kb downstream 12888 true scaffold_6: 24199021-24211908 Theobroma cacao
Thecc1EG029760 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24201909-24211908 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824599 5264 Brassicales-Malvales View MSA
124320253 5266 SBM View MSA
124248458 5268 Malvidae View MSA
124072979 5270 Rosid View MSA
123749696 5271 Pentapetalae View MSA
122794097 5272 Eudicot View MSA
122049695 5273 Angiosperm View MSA
121311547 5274 Embryophyte View MSA
123348830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain