Gene : Thecc1EG029761 T. cacao v1.1
Defline:  (1 of 1) PTHR10891//PTHR10891:SF619 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1727
Name:  ? Thecc1EG029761 Secondary Identifier:  ? PAC:27437674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029761 0.5kb upstream 0.5kb upstream 4358 true scaffold_6: 24201949-24206306 Theobroma cacao
Thecc1EG029761 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24205807-24206306 Theobroma cacao
Thecc1EG029761 0.5kb downstream 0.5kb downstream 4358 true scaffold_6: 24201449-24205806 Theobroma cacao
Thecc1EG029761 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24201449-24201948 Theobroma cacao
Thecc1EG029761 1.0kb upstream 1.0kb upstream 4858 true scaffold_6: 24201949-24206806 Theobroma cacao
Thecc1EG029761 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24205807-24206806 Theobroma cacao
Thecc1EG029761 1.0kb downstream 1.0kb downstream 4858 true scaffold_6: 24200949-24205806 Theobroma cacao
Thecc1EG029761 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24200949-24201948 Theobroma cacao
Thecc1EG029761 2.0kb upstream 2.0kb upstream 5858 true scaffold_6: 24201949-24207806 Theobroma cacao
Thecc1EG029761 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24205807-24207806 Theobroma cacao
Thecc1EG029761 2.0kb downstream 2.0kb downstream 5858 true scaffold_6: 24199949-24205806 Theobroma cacao
Thecc1EG029761 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24199949-24201948 Theobroma cacao
Thecc1EG029761 5.0kb upstream 5.0kb upstream 8858 true scaffold_6: 24201949-24210806 Theobroma cacao
Thecc1EG029761 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24205807-24210806 Theobroma cacao
Thecc1EG029761 5.0kb downstream 5.0kb downstream 8858 true scaffold_6: 24196949-24205806 Theobroma cacao
Thecc1EG029761 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24196949-24201948 Theobroma cacao
Thecc1EG029761 10.0kb upstream 10.0kb upstream 13858 true scaffold_6: 24201949-24215806 Theobroma cacao
Thecc1EG029761 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24205807-24215806 Theobroma cacao
Thecc1EG029761 10.0kb downstream 10.0kb downstream 13858 true scaffold_6: 24191949-24205806 Theobroma cacao
Thecc1EG029761 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24191949-24201948 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792090 5273 Angiosperm View MSA
123820911 5264 Brassicales-Malvales Singleton cluster - no MSA
124317108 5266 SBM Singleton cluster - no MSA
124248501 5268 Malvidae View MSA
124071716 5270 Rosid View MSA
123745567 5271 Pentapetalae View MSA
122796343 5272 Eudicot View MSA
121063344 5274 Embryophyte View MSA
123103101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain