Gene : Thecc1EG029754 T. cacao v1.1
Defline:  (1 of 1) K03405 - magnesium chelatase subunit I (chlI, bchI) Genomic Order:  1721
Name:  ? Thecc1EG029754 Secondary Identifier:  ? PAC:27438646
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CHLOROPHYLL-SYN Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029754 0.5kb upstream 0.5kb upstream 2837 true scaffold_6: 24175788-24178624 Theobroma cacao
Thecc1EG029754 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24175788-24176287 Theobroma cacao
Thecc1EG029754 0.5kb downstream 0.5kb downstream 2837 true scaffold_6: 24176288-24179124 Theobroma cacao
Thecc1EG029754 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24178625-24179124 Theobroma cacao
Thecc1EG029754 1.0kb upstream 1.0kb upstream 3337 true scaffold_6: 24175288-24178624 Theobroma cacao
Thecc1EG029754 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24175288-24176287 Theobroma cacao
Thecc1EG029754 1.0kb downstream 1.0kb downstream 3337 true scaffold_6: 24176288-24179624 Theobroma cacao
Thecc1EG029754 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24178625-24179624 Theobroma cacao
Thecc1EG029754 2.0kb upstream 2.0kb upstream 4337 true scaffold_6: 24174288-24178624 Theobroma cacao
Thecc1EG029754 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24174288-24176287 Theobroma cacao
Thecc1EG029754 2.0kb downstream 2.0kb downstream 4337 true scaffold_6: 24176288-24180624 Theobroma cacao
Thecc1EG029754 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24178625-24180624 Theobroma cacao
Thecc1EG029754 5.0kb upstream 5.0kb upstream 7337 true scaffold_6: 24171288-24178624 Theobroma cacao
Thecc1EG029754 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24171288-24176287 Theobroma cacao
Thecc1EG029754 5.0kb downstream 5.0kb downstream 7337 true scaffold_6: 24176288-24183624 Theobroma cacao
Thecc1EG029754 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24178625-24183624 Theobroma cacao
Thecc1EG029754 10.0kb upstream 10.0kb upstream 12337 true scaffold_6: 24166288-24178624 Theobroma cacao
Thecc1EG029754 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24166288-24176287 Theobroma cacao
Thecc1EG029754 10.0kb downstream 10.0kb downstream 12337 true scaffold_6: 24176288-24188624 Theobroma cacao
Thecc1EG029754 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24178625-24188624 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
123838175 5264 Brassicales-Malvales View MSA
124343435 5266 SBM View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain