Gene : Thecc1EG029740 T. cacao v1.1
Defline:  (1 of 1) PTHR18968//PTHR18968:SF132 - THIAMINE PYROPHOSPHATE ENZYMES // SUBFAMILY NOT NAMED Genomic Order:  1708
Name:  ? Thecc1EG029740 Secondary Identifier:  ? PAC:27440923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5486 Theobroma cacao pathologic  
Tcacao PWY-6330 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029740 0.5kb upstream 0.5kb upstream 5385 true scaffold_6: 24115028-24120412 Theobroma cacao
Thecc1EG029740 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24119913-24120412 Theobroma cacao
Thecc1EG029740 0.5kb downstream 0.5kb downstream 5385 true scaffold_6: 24114528-24119912 Theobroma cacao
Thecc1EG029740 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24114528-24115027 Theobroma cacao
Thecc1EG029740 1.0kb upstream 1.0kb upstream 5885 true scaffold_6: 24115028-24120912 Theobroma cacao
Thecc1EG029740 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24119913-24120912 Theobroma cacao
Thecc1EG029740 1.0kb downstream 1.0kb downstream 5885 true scaffold_6: 24114028-24119912 Theobroma cacao
Thecc1EG029740 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24114028-24115027 Theobroma cacao
Thecc1EG029740 2.0kb upstream 2.0kb upstream 6885 true scaffold_6: 24115028-24121912 Theobroma cacao
Thecc1EG029740 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24119913-24121912 Theobroma cacao
Thecc1EG029740 2.0kb downstream 2.0kb downstream 6885 true scaffold_6: 24113028-24119912 Theobroma cacao
Thecc1EG029740 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24113028-24115027 Theobroma cacao
Thecc1EG029740 5.0kb upstream 5.0kb upstream 9885 true scaffold_6: 24115028-24124912 Theobroma cacao
Thecc1EG029740 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24119913-24124912 Theobroma cacao
Thecc1EG029740 5.0kb downstream 5.0kb downstream 9885 true scaffold_6: 24110028-24119912 Theobroma cacao
Thecc1EG029740 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24110028-24115027 Theobroma cacao
Thecc1EG029740 10.0kb upstream 10.0kb upstream 14885 true scaffold_6: 24115028-24129912 Theobroma cacao
Thecc1EG029740 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24119913-24129912 Theobroma cacao
Thecc1EG029740 10.0kb downstream 10.0kb downstream 14885 true scaffold_6: 24105028-24119912 Theobroma cacao
Thecc1EG029740 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24105028-24115027 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791820 5273 Angiosperm View MSA
123824294 5264 Brassicales-Malvales View MSA
124348799 5266 SBM View MSA
124246131 5268 Malvidae View MSA
124070519 5270 Rosid View MSA
123742600 5271 Pentapetalae View MSA
122794163 5272 Eudicot View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain