Gene : Pavir.J126200 P. virgatum v4.1
Defline:  (1 of 4) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  3
Name:  ? Pavir.J126200 Secondary Identifier:  ? PAC:37562648
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J126200 0.5kb upstream 0.5kb upstream 995 true scaffold_1501: 13971-14965 Panicum virgatum
Pavir.J126200 0.5kb upstream 0.5kb upstream 500 false scaffold_1501: 13971-14470 Panicum virgatum
Pavir.J126200 0.5kb downstream 0.5kb downstream 995 true scaffold_1501: 14471-15465 Panicum virgatum
Pavir.J126200 0.5kb downstream 0.5kb downstream 500 false scaffold_1501: 14966-15465 Panicum virgatum
Pavir.J126200 1.0kb upstream 1.0kb upstream 1495 true scaffold_1501: 13471-14965 Panicum virgatum
Pavir.J126200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1501: 13471-14470 Panicum virgatum
Pavir.J126200 1.0kb downstream 1.0kb downstream 1495 true scaffold_1501: 14471-15965 Panicum virgatum
Pavir.J126200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1501: 14966-15965 Panicum virgatum
Pavir.J126200 2.0kb upstream 2.0kb upstream 2495 true scaffold_1501: 12471-14965 Panicum virgatum
Pavir.J126200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1501: 12471-14470 Panicum virgatum
Pavir.J126200 2.0kb downstream 2.0kb downstream 2495 true scaffold_1501: 14471-16965 Panicum virgatum
Pavir.J126200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1501: 14966-16965 Panicum virgatum
Pavir.J126200 5.0kb upstream 5.0kb upstream 5495 true scaffold_1501: 9471-14965 Panicum virgatum
Pavir.J126200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1501: 9471-14470 Panicum virgatum
Pavir.J126200 5.0kb downstream 5.0kb downstream 5495 true scaffold_1501: 14471-19965 Panicum virgatum
Pavir.J126200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1501: 14966-19965 Panicum virgatum
Pavir.J126200 10.0kb upstream 10.0kb upstream 10495 true scaffold_1501: 4471-14965 Panicum virgatum
Pavir.J126200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1501: 4471-14470 Panicum virgatum
Pavir.J126200 10.0kb downstream 10.0kb downstream 8254 true scaffold_1501: 14471-22724 Panicum virgatum
Pavir.J126200 10.0kb downstream 10.0kb downstream 7759 false scaffold_1501: 14966-22724 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122075972 5267 Panicoideae Singleton cluster - no MSA
124588794 5269 Grass View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain