Gene : Pavir.1NG259400 P. virgatum v4.1
Defline:  (1 of 2) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  2352
Name:  ? Pavir.1NG259400 Secondary Identifier:  ? PAC:37609664
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG259400 0.5kb upstream 0.5kb upstream 1707 true Chr01N: 59596691-59598397 Panicum virgatum
Pavir.1NG259400 0.5kb upstream 0.5kb upstream 500 false Chr01N: 59597898-59598397 Panicum virgatum
Pavir.1NG259400 0.5kb downstream 0.5kb downstream 1707 true Chr01N: 59596191-59597897 Panicum virgatum
Pavir.1NG259400 0.5kb downstream 0.5kb downstream 500 false Chr01N: 59596191-59596690 Panicum virgatum
Pavir.1NG259400 1.0kb upstream 1.0kb upstream 2207 true Chr01N: 59596691-59598897 Panicum virgatum
Pavir.1NG259400 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 59597898-59598897 Panicum virgatum
Pavir.1NG259400 1.0kb downstream 1.0kb downstream 2207 true Chr01N: 59595691-59597897 Panicum virgatum
Pavir.1NG259400 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 59595691-59596690 Panicum virgatum
Pavir.1NG259400 2.0kb upstream 2.0kb upstream 3207 true Chr01N: 59596691-59599897 Panicum virgatum
Pavir.1NG259400 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 59597898-59599897 Panicum virgatum
Pavir.1NG259400 2.0kb downstream 2.0kb downstream 3207 true Chr01N: 59594691-59597897 Panicum virgatum
Pavir.1NG259400 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 59594691-59596690 Panicum virgatum
Pavir.1NG259400 5.0kb upstream 5.0kb upstream 6207 true Chr01N: 59596691-59602897 Panicum virgatum
Pavir.1NG259400 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 59597898-59602897 Panicum virgatum
Pavir.1NG259400 5.0kb downstream 5.0kb downstream 6207 true Chr01N: 59591691-59597897 Panicum virgatum
Pavir.1NG259400 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 59591691-59596690 Panicum virgatum
Pavir.1NG259400 10.0kb upstream 10.0kb upstream 11207 true Chr01N: 59596691-59607897 Panicum virgatum
Pavir.1NG259400 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 59597898-59607897 Panicum virgatum
Pavir.1NG259400 10.0kb downstream 10.0kb downstream 11207 true Chr01N: 59586691-59597897 Panicum virgatum
Pavir.1NG259400 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 59586691-59596690 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122088302 5267 Panicoideae Singleton cluster - no MSA
124582930 5269 Grass View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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