Gene : Thecc1EG029994 T. cacao v1.1
Defline:  (1 of 2) PTHR22912:SF180 - 3-PHENYLPROPIONATE/CINNAMIC ACID DIOXYGENASE FERREDOXIN--NAD(+) REDUCTASE COMPONENT Genomic Order:  1943
Name:  ? Thecc1EG029994 Secondary Identifier:  ? PAC:27438365
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7279 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029994 0.5kb upstream 0.5kb upstream 5046 true scaffold_6: 25312354-25317399 Theobroma cacao
Thecc1EG029994 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25312354-25312853 Theobroma cacao
Thecc1EG029994 0.5kb downstream 0.5kb downstream 5046 true scaffold_6: 25312854-25317899 Theobroma cacao
Thecc1EG029994 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25317400-25317899 Theobroma cacao
Thecc1EG029994 1.0kb upstream 1.0kb upstream 5546 true scaffold_6: 25311854-25317399 Theobroma cacao
Thecc1EG029994 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25311854-25312853 Theobroma cacao
Thecc1EG029994 1.0kb downstream 1.0kb downstream 5546 true scaffold_6: 25312854-25318399 Theobroma cacao
Thecc1EG029994 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25317400-25318399 Theobroma cacao
Thecc1EG029994 2.0kb upstream 2.0kb upstream 6546 true scaffold_6: 25310854-25317399 Theobroma cacao
Thecc1EG029994 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25310854-25312853 Theobroma cacao
Thecc1EG029994 2.0kb downstream 2.0kb downstream 6546 true scaffold_6: 25312854-25319399 Theobroma cacao
Thecc1EG029994 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25317400-25319399 Theobroma cacao
Thecc1EG029994 5.0kb upstream 5.0kb upstream 9546 true scaffold_6: 25307854-25317399 Theobroma cacao
Thecc1EG029994 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25307854-25312853 Theobroma cacao
Thecc1EG029994 5.0kb downstream 5.0kb downstream 9546 true scaffold_6: 25312854-25322399 Theobroma cacao
Thecc1EG029994 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25317400-25322399 Theobroma cacao
Thecc1EG029994 10.0kb upstream 10.0kb upstream 14546 true scaffold_6: 25302854-25317399 Theobroma cacao
Thecc1EG029994 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25302854-25312853 Theobroma cacao
Thecc1EG029994 10.0kb downstream 10.0kb downstream 14546 true scaffold_6: 25312854-25327399 Theobroma cacao
Thecc1EG029994 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25317400-25327399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827857 5264 Brassicales-Malvales View MSA
124343190 5266 SBM View MSA
124243492 5268 Malvidae View MSA
124072571 5270 Rosid View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain