Gene : Thecc1EG029997 T. cacao v1.1
Defline:  (1 of 2) PTHR11886:SF22 - DYNEIN LIGHT CHAIN TYPE 1 FAMILY PROTEIN Genomic Order:  1946
Name:  ? Thecc1EG029997 Secondary Identifier:  ? PAC:27438254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029997 0.5kb upstream 0.5kb upstream 1679 true scaffold_6: 25331435-25333113 Theobroma cacao
Thecc1EG029997 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25332614-25333113 Theobroma cacao
Thecc1EG029997 0.5kb downstream 0.5kb downstream 1679 true scaffold_6: 25330935-25332613 Theobroma cacao
Thecc1EG029997 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25330935-25331434 Theobroma cacao
Thecc1EG029997 1.0kb upstream 1.0kb upstream 2179 true scaffold_6: 25331435-25333613 Theobroma cacao
Thecc1EG029997 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25332614-25333613 Theobroma cacao
Thecc1EG029997 1.0kb downstream 1.0kb downstream 2179 true scaffold_6: 25330435-25332613 Theobroma cacao
Thecc1EG029997 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25330435-25331434 Theobroma cacao
Thecc1EG029997 2.0kb upstream 2.0kb upstream 3179 true scaffold_6: 25331435-25334613 Theobroma cacao
Thecc1EG029997 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25332614-25334613 Theobroma cacao
Thecc1EG029997 2.0kb downstream 2.0kb downstream 3179 true scaffold_6: 25329435-25332613 Theobroma cacao
Thecc1EG029997 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25329435-25331434 Theobroma cacao
Thecc1EG029997 5.0kb upstream 5.0kb upstream 6179 true scaffold_6: 25331435-25337613 Theobroma cacao
Thecc1EG029997 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25332614-25337613 Theobroma cacao
Thecc1EG029997 5.0kb downstream 5.0kb downstream 6179 true scaffold_6: 25326435-25332613 Theobroma cacao
Thecc1EG029997 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25326435-25331434 Theobroma cacao
Thecc1EG029997 10.0kb upstream 10.0kb upstream 11179 true scaffold_6: 25331435-25342613 Theobroma cacao
Thecc1EG029997 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25332614-25342613 Theobroma cacao
Thecc1EG029997 10.0kb downstream 10.0kb downstream 11179 true scaffold_6: 25321435-25332613 Theobroma cacao
Thecc1EG029997 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25321435-25331434 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123820814 5264 Brassicales-Malvales Singleton cluster - no MSA
124317016 5266 SBM Singleton cluster - no MSA
124251949 5268 Malvidae View MSA
124061505 5270 Rosid View MSA
123739752 5271 Pentapetalae View MSA
122791771 5272 Eudicot View MSA
122043951 5273 Angiosperm View MSA
121349084 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain