Gene : Pavir.J112100 P. virgatum v4.1
Defline:  (1 of 2) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  1
Name:  ? Pavir.J112100 Secondary Identifier:  ? PAC:37678827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J112100 0.5kb upstream 0.5kb upstream 986 true scaffold_1438: 21259-22244 Panicum virgatum
Pavir.J112100 0.5kb upstream 0.5kb upstream 500 false scaffold_1438: 21745-22244 Panicum virgatum
Pavir.J112100 0.5kb downstream 0.5kb downstream 986 true scaffold_1438: 20759-21744 Panicum virgatum
Pavir.J112100 0.5kb downstream 0.5kb downstream 500 false scaffold_1438: 20759-21258 Panicum virgatum
Pavir.J112100 1.0kb upstream 1.0kb upstream 1486 true scaffold_1438: 21259-22744 Panicum virgatum
Pavir.J112100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1438: 21745-22744 Panicum virgatum
Pavir.J112100 1.0kb downstream 1.0kb downstream 1486 true scaffold_1438: 20259-21744 Panicum virgatum
Pavir.J112100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1438: 20259-21258 Panicum virgatum
Pavir.J112100 2.0kb upstream 2.0kb upstream 1938 true scaffold_1438: 21259-23196 Panicum virgatum
Pavir.J112100 2.0kb upstream 2.0kb upstream 1452 false scaffold_1438: 21745-23196 Panicum virgatum
Pavir.J112100 2.0kb downstream 2.0kb downstream 2486 true scaffold_1438: 19259-21744 Panicum virgatum
Pavir.J112100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1438: 19259-21258 Panicum virgatum
Pavir.J112100 5.0kb upstream 5.0kb upstream 1938 true scaffold_1438: 21259-23196 Panicum virgatum
Pavir.J112100 5.0kb upstream 5.0kb upstream 1452 false scaffold_1438: 21745-23196 Panicum virgatum
Pavir.J112100 5.0kb downstream 5.0kb downstream 5486 true scaffold_1438: 16259-21744 Panicum virgatum
Pavir.J112100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1438: 16259-21258 Panicum virgatum
Pavir.J112100 10.0kb upstream 10.0kb upstream 1938 true scaffold_1438: 21259-23196 Panicum virgatum
Pavir.J112100 10.0kb upstream 10.0kb upstream 1452 false scaffold_1438: 21745-23196 Panicum virgatum
Pavir.J112100 10.0kb downstream 10.0kb downstream 10486 true scaffold_1438: 11259-21744 Panicum virgatum
Pavir.J112100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1438: 11259-21258 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182669 5267 Panicoideae View MSA
124584366 5269 Grass View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain