Gene : Thecc1EG029991 T. cacao v1.1
Defline:  (1 of 1) PTHR34049//PTHR34049:SF1 - FAMILY NOT NAMED // F-BOX PROTEIN SKIP27 Genomic Order:  1940
Name:  ? Thecc1EG029991 Secondary Identifier:  ? PAC:27440354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029991 0.5kb upstream 0.5kb upstream 1661 true scaffold_6: 25298100-25299760 Theobroma cacao
Thecc1EG029991 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25298100-25298599 Theobroma cacao
Thecc1EG029991 0.5kb downstream 0.5kb downstream 1661 true scaffold_6: 25298600-25300260 Theobroma cacao
Thecc1EG029991 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25299761-25300260 Theobroma cacao
Thecc1EG029991 1.0kb upstream 1.0kb upstream 2161 true scaffold_6: 25297600-25299760 Theobroma cacao
Thecc1EG029991 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25297600-25298599 Theobroma cacao
Thecc1EG029991 1.0kb downstream 1.0kb downstream 2161 true scaffold_6: 25298600-25300760 Theobroma cacao
Thecc1EG029991 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25299761-25300760 Theobroma cacao
Thecc1EG029991 2.0kb upstream 2.0kb upstream 3161 true scaffold_6: 25296600-25299760 Theobroma cacao
Thecc1EG029991 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25296600-25298599 Theobroma cacao
Thecc1EG029991 2.0kb downstream 2.0kb downstream 3161 true scaffold_6: 25298600-25301760 Theobroma cacao
Thecc1EG029991 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25299761-25301760 Theobroma cacao
Thecc1EG029991 5.0kb upstream 5.0kb upstream 6161 true scaffold_6: 25293600-25299760 Theobroma cacao
Thecc1EG029991 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25293600-25298599 Theobroma cacao
Thecc1EG029991 5.0kb downstream 5.0kb downstream 6161 true scaffold_6: 25298600-25304760 Theobroma cacao
Thecc1EG029991 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25299761-25304760 Theobroma cacao
Thecc1EG029991 10.0kb upstream 10.0kb upstream 11161 true scaffold_6: 25288600-25299760 Theobroma cacao
Thecc1EG029991 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25288600-25298599 Theobroma cacao
Thecc1EG029991 10.0kb downstream 10.0kb downstream 11161 true scaffold_6: 25298600-25309760 Theobroma cacao
Thecc1EG029991 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25299761-25309760 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049997 5273 Angiosperm View MSA
123838950 5264 Brassicales-Malvales View MSA
124338116 5266 SBM View MSA
124238809 5268 Malvidae View MSA
124063165 5270 Rosid View MSA
123746999 5271 Pentapetalae View MSA
122794016 5272 Eudicot View MSA
121346650 5274 Embryophyte View MSA
123380419 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain