Gene : Pavir.1NG229200 P. virgatum v4.1
Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  2078
Name:  ? Pavir.1NG229200 Secondary Identifier:  ? PAC:37609751
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum CALVIN-PWY Panicum virgatum pathologic  
Pvirgatum PHOTOALL-PWY Panicum virgatum pathologic  
Pvirgatum PWY-5723 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG229200 0.5kb upstream 0.5kb upstream 2929 true Chr01N: 48543542-48546470 Panicum virgatum
Pavir.1NG229200 0.5kb upstream 0.5kb upstream 500 false Chr01N: 48543542-48544041 Panicum virgatum
Pavir.1NG229200 0.5kb downstream 0.5kb downstream 2929 true Chr01N: 48544042-48546970 Panicum virgatum
Pavir.1NG229200 0.5kb downstream 0.5kb downstream 500 false Chr01N: 48546471-48546970 Panicum virgatum
Pavir.1NG229200 1.0kb upstream 1.0kb upstream 3429 true Chr01N: 48543042-48546470 Panicum virgatum
Pavir.1NG229200 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 48543042-48544041 Panicum virgatum
Pavir.1NG229200 1.0kb downstream 1.0kb downstream 3429 true Chr01N: 48544042-48547470 Panicum virgatum
Pavir.1NG229200 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 48546471-48547470 Panicum virgatum
Pavir.1NG229200 2.0kb upstream 2.0kb upstream 4429 true Chr01N: 48542042-48546470 Panicum virgatum
Pavir.1NG229200 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 48542042-48544041 Panicum virgatum
Pavir.1NG229200 2.0kb downstream 2.0kb downstream 4429 true Chr01N: 48544042-48548470 Panicum virgatum
Pavir.1NG229200 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 48546471-48548470 Panicum virgatum
Pavir.1NG229200 5.0kb upstream 5.0kb upstream 7429 true Chr01N: 48539042-48546470 Panicum virgatum
Pavir.1NG229200 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 48539042-48544041 Panicum virgatum
Pavir.1NG229200 5.0kb downstream 5.0kb downstream 7429 true Chr01N: 48544042-48551470 Panicum virgatum
Pavir.1NG229200 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 48546471-48551470 Panicum virgatum
Pavir.1NG229200 10.0kb upstream 10.0kb upstream 12429 true Chr01N: 48534042-48546470 Panicum virgatum
Pavir.1NG229200 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 48534042-48544041 Panicum virgatum
Pavir.1NG229200 10.0kb downstream 10.0kb downstream 12429 true Chr01N: 48544042-48556470 Panicum virgatum
Pavir.1NG229200 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 48546471-48556470 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199516 5267 Panicoideae View MSA
124590513 5269 Grass View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain