Gene : Pavir.J082100 P. virgatum v4.1
Defline:  (1 of 282) PF00005 - ABC transporter (ABC_tran) Genomic Order:  1
Name:  ? Pavir.J082100 Secondary Identifier:  ? PAC:37588916
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J082100 0.5kb upstream 0.5kb upstream 3295 true scaffold_1300: 13090-16384 Panicum virgatum
Pavir.J082100 0.5kb upstream 0.5kb upstream 500 false scaffold_1300: 15885-16384 Panicum virgatum
Pavir.J082100 0.5kb downstream 0.5kb downstream 3295 true scaffold_1300: 12590-15884 Panicum virgatum
Pavir.J082100 0.5kb downstream 0.5kb downstream 500 false scaffold_1300: 12590-13089 Panicum virgatum
Pavir.J082100 1.0kb upstream 1.0kb upstream 3795 true scaffold_1300: 13090-16884 Panicum virgatum
Pavir.J082100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1300: 15885-16884 Panicum virgatum
Pavir.J082100 1.0kb downstream 1.0kb downstream 3795 true scaffold_1300: 12090-15884 Panicum virgatum
Pavir.J082100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1300: 12090-13089 Panicum virgatum
Pavir.J082100 2.0kb upstream 2.0kb upstream 4795 true scaffold_1300: 13090-17884 Panicum virgatum
Pavir.J082100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1300: 15885-17884 Panicum virgatum
Pavir.J082100 2.0kb downstream 2.0kb downstream 4795 true scaffold_1300: 11090-15884 Panicum virgatum
Pavir.J082100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1300: 11090-13089 Panicum virgatum
Pavir.J082100 5.0kb upstream 5.0kb upstream 7795 true scaffold_1300: 13090-20884 Panicum virgatum
Pavir.J082100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1300: 15885-20884 Panicum virgatum
Pavir.J082100 5.0kb downstream 5.0kb downstream 7795 true scaffold_1300: 8090-15884 Panicum virgatum
Pavir.J082100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1300: 8090-13089 Panicum virgatum
Pavir.J082100 10.0kb upstream 10.0kb upstream 11274 true scaffold_1300: 13090-24363 Panicum virgatum
Pavir.J082100 10.0kb upstream 10.0kb upstream 8479 false scaffold_1300: 15885-24363 Panicum virgatum
Pavir.J082100 10.0kb downstream 10.0kb downstream 12795 true scaffold_1300: 3090-15884 Panicum virgatum
Pavir.J082100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1300: 3090-13089 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028436 5273 Angiosperm View MSA
122082750 5267 Panicoideae Singleton cluster - no MSA
124380993 5269 Grass Singleton cluster - no MSA
123429075 5275 Viridiplantae View MSA
121297928 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain