Gene : Thecc1EG029972 T. cacao v1.1

Defline:  (1 of 2) PTHR33098:SF10 - T28P6.11 PROTEIN Genomic Order:  1922
Name:  ? Thecc1EG029972 Secondary Identifier:  ? PAC:27438766

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029972 0.5kb upstream 0.5kb upstream 2416 true scaffold_6: 25222715-25225130 Theobroma cacao
Thecc1EG029972 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25222715-25223214 Theobroma cacao
Thecc1EG029972 0.5kb downstream 0.5kb downstream 2416 true scaffold_6: 25223215-25225630 Theobroma cacao
Thecc1EG029972 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25225131-25225630 Theobroma cacao
Thecc1EG029972 1.0kb upstream 1.0kb upstream 2916 true scaffold_6: 25222215-25225130 Theobroma cacao
Thecc1EG029972 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25222215-25223214 Theobroma cacao
Thecc1EG029972 1.0kb downstream 1.0kb downstream 2916 true scaffold_6: 25223215-25226130 Theobroma cacao
Thecc1EG029972 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25225131-25226130 Theobroma cacao
Thecc1EG029972 2.0kb upstream 2.0kb upstream 3916 true scaffold_6: 25221215-25225130 Theobroma cacao
Thecc1EG029972 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25221215-25223214 Theobroma cacao
Thecc1EG029972 2.0kb downstream 2.0kb downstream 3916 true scaffold_6: 25223215-25227130 Theobroma cacao
Thecc1EG029972 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25225131-25227130 Theobroma cacao
Thecc1EG029972 5.0kb upstream 5.0kb upstream 6916 true scaffold_6: 25218215-25225130 Theobroma cacao
Thecc1EG029972 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25218215-25223214 Theobroma cacao
Thecc1EG029972 5.0kb downstream 5.0kb downstream 6916 true scaffold_6: 25223215-25230130 Theobroma cacao
Thecc1EG029972 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25225131-25230130 Theobroma cacao
Thecc1EG029972 10.0kb upstream 10.0kb upstream 11916 true scaffold_6: 25213215-25225130 Theobroma cacao
Thecc1EG029972 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25213215-25223214 Theobroma cacao
Thecc1EG029972 10.0kb downstream 10.0kb downstream 11916 true scaffold_6: 25223215-25235130 Theobroma cacao
Thecc1EG029972 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25225131-25235130 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838356 5264 Brassicales-Malvales View MSA
124350734 5266 SBM View MSA
124251466 5268 Malvidae View MSA
124070091 5270 Rosid View MSA
123750199 5271 Pentapetalae View MSA
122796107 5272 Eudicot View MSA
122050129 5273 Angiosperm View MSA
121311757 5274 Embryophyte View MSA
123349012 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain