Gene : Thecc1EG029976 T. cacao v1.1
Defline:  (1 of 2) PTHR23336//PTHR23336:SF10 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1-RELATED Genomic Order:  1926
Name:  ? Thecc1EG029976 Secondary Identifier:  ? PAC:27438380
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029976 0.5kb upstream 0.5kb upstream 10156 true scaffold_6: 25237897-25248052 Theobroma cacao
Thecc1EG029976 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25247553-25248052 Theobroma cacao
Thecc1EG029976 0.5kb downstream 0.5kb downstream 10156 true scaffold_6: 25237397-25247552 Theobroma cacao
Thecc1EG029976 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25237397-25237896 Theobroma cacao
Thecc1EG029976 1.0kb upstream 1.0kb upstream 10656 true scaffold_6: 25237897-25248552 Theobroma cacao
Thecc1EG029976 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25247553-25248552 Theobroma cacao
Thecc1EG029976 1.0kb downstream 1.0kb downstream 10656 true scaffold_6: 25236897-25247552 Theobroma cacao
Thecc1EG029976 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25236897-25237896 Theobroma cacao
Thecc1EG029976 2.0kb upstream 2.0kb upstream 11656 true scaffold_6: 25237897-25249552 Theobroma cacao
Thecc1EG029976 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25247553-25249552 Theobroma cacao
Thecc1EG029976 2.0kb downstream 2.0kb downstream 11656 true scaffold_6: 25235897-25247552 Theobroma cacao
Thecc1EG029976 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25235897-25237896 Theobroma cacao
Thecc1EG029976 5.0kb upstream 5.0kb upstream 14656 true scaffold_6: 25237897-25252552 Theobroma cacao
Thecc1EG029976 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25247553-25252552 Theobroma cacao
Thecc1EG029976 5.0kb downstream 5.0kb downstream 14656 true scaffold_6: 25232897-25247552 Theobroma cacao
Thecc1EG029976 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25232897-25237896 Theobroma cacao
Thecc1EG029976 10.0kb upstream 10.0kb upstream 19656 true scaffold_6: 25237897-25257552 Theobroma cacao
Thecc1EG029976 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25247553-25257552 Theobroma cacao
Thecc1EG029976 10.0kb downstream 10.0kb downstream 19656 true scaffold_6: 25227897-25247552 Theobroma cacao
Thecc1EG029976 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25227897-25237896 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841430 5264 Brassicales-Malvales View MSA
124347339 5266 SBM View MSA
124244571 5268 Malvidae View MSA
124061756 5270 Rosid View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain