Gene : Pavir.J065200 P. virgatum v4.1
Defline:  (1 of 2) PTHR23315:SF111 - U-BOX DOMAIN-CONTAINING PROTEIN 14 Genomic Order:  1
Name:  ? Pavir.J065200 Secondary Identifier:  ? PAC:37588979
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-7511 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J065200 0.5kb upstream 0.5kb upstream 3084 true scaffold_1228: 2940-6023 Panicum virgatum
Pavir.J065200 0.5kb upstream 0.5kb upstream 500 false scaffold_1228: 5524-6023 Panicum virgatum
Pavir.J065200 0.5kb downstream 0.5kb downstream 3084 true scaffold_1228: 2440-5523 Panicum virgatum
Pavir.J065200 0.5kb downstream 0.5kb downstream 500 false scaffold_1228: 2440-2939 Panicum virgatum
Pavir.J065200 1.0kb upstream 1.0kb upstream 3584 true scaffold_1228: 2940-6523 Panicum virgatum
Pavir.J065200 1.0kb upstream 1.0kb upstream 1000 false scaffold_1228: 5524-6523 Panicum virgatum
Pavir.J065200 1.0kb downstream 1.0kb downstream 3584 true scaffold_1228: 1940-5523 Panicum virgatum
Pavir.J065200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1228: 1940-2939 Panicum virgatum
Pavir.J065200 2.0kb upstream 2.0kb upstream 4584 true scaffold_1228: 2940-7523 Panicum virgatum
Pavir.J065200 2.0kb upstream 2.0kb upstream 2000 false scaffold_1228: 5524-7523 Panicum virgatum
Pavir.J065200 2.0kb downstream 2.0kb downstream 4584 true scaffold_1228: 940-5523 Panicum virgatum
Pavir.J065200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1228: 940-2939 Panicum virgatum
Pavir.J065200 5.0kb upstream 5.0kb upstream 7584 true scaffold_1228: 2940-10523 Panicum virgatum
Pavir.J065200 5.0kb upstream 5.0kb upstream 5000 false scaffold_1228: 5524-10523 Panicum virgatum
Pavir.J065200 5.0kb downstream 5.0kb downstream 5523 true scaffold_1228: 1-5523 Panicum virgatum
Pavir.J065200 5.0kb downstream 5.0kb downstream 2939 false scaffold_1228: 1-2939 Panicum virgatum
Pavir.J065200 10.0kb upstream 10.0kb upstream 12584 true scaffold_1228: 2940-15523 Panicum virgatum
Pavir.J065200 10.0kb upstream 10.0kb upstream 10000 false scaffold_1228: 5524-15523 Panicum virgatum
Pavir.J065200 10.0kb downstream 10.0kb downstream 5523 true scaffold_1228: 1-5523 Panicum virgatum
Pavir.J065200 10.0kb downstream 10.0kb downstream 2939 false scaffold_1228: 1-2939 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196571 5267 Panicoideae View MSA
124574030 5269 Grass View MSA
122042286 5273 Angiosperm View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain