Gene : Pavir.1NG343300 P. virgatum v4.1
Defline:  (1 of 6) K02267 - cytochrome c oxidase subunit 6b (COX6B) Genomic Order:  3112
Name:  ? Pavir.1NG343300 Secondary Identifier:  ? PAC:37612619
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-3781 Panicum virgatum pathologic  
Pvirgatum PWY-7279 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG343300 0.5kb upstream 0.5kb upstream 5160 true Chr01N: 73582052-73587211 Panicum virgatum
Pavir.1NG343300 0.5kb upstream 0.5kb upstream 500 false Chr01N: 73586712-73587211 Panicum virgatum
Pavir.1NG343300 0.5kb downstream 0.5kb downstream 5160 true Chr01N: 73581552-73586711 Panicum virgatum
Pavir.1NG343300 0.5kb downstream 0.5kb downstream 500 false Chr01N: 73581552-73582051 Panicum virgatum
Pavir.1NG343300 1.0kb upstream 1.0kb upstream 5660 true Chr01N: 73582052-73587711 Panicum virgatum
Pavir.1NG343300 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 73586712-73587711 Panicum virgatum
Pavir.1NG343300 1.0kb downstream 1.0kb downstream 5660 true Chr01N: 73581052-73586711 Panicum virgatum
Pavir.1NG343300 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 73581052-73582051 Panicum virgatum
Pavir.1NG343300 2.0kb upstream 2.0kb upstream 6660 true Chr01N: 73582052-73588711 Panicum virgatum
Pavir.1NG343300 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 73586712-73588711 Panicum virgatum
Pavir.1NG343300 2.0kb downstream 2.0kb downstream 6660 true Chr01N: 73580052-73586711 Panicum virgatum
Pavir.1NG343300 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 73580052-73582051 Panicum virgatum
Pavir.1NG343300 5.0kb upstream 5.0kb upstream 9660 true Chr01N: 73582052-73591711 Panicum virgatum
Pavir.1NG343300 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 73586712-73591711 Panicum virgatum
Pavir.1NG343300 5.0kb downstream 5.0kb downstream 9660 true Chr01N: 73577052-73586711 Panicum virgatum
Pavir.1NG343300 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 73577052-73582051 Panicum virgatum
Pavir.1NG343300 10.0kb upstream 10.0kb upstream 14660 true Chr01N: 73582052-73596711 Panicum virgatum
Pavir.1NG343300 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 73586712-73596711 Panicum virgatum
Pavir.1NG343300 10.0kb downstream 10.0kb downstream 14660 true Chr01N: 73572052-73586711 Panicum virgatum
Pavir.1NG343300 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 73572052-73582051 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177465 5267 Panicoideae View MSA
124583065 5269 Grass View MSA
122042170 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain