Gene : Thecc1EG029930 T. cacao v1.1
Defline:  (1 of 1) PTHR11452//PTHR11452:SF36 - ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE // SUBFAMILY NOT NAMED Genomic Order:  1884
Name:  ? Thecc1EG029930 Secondary Identifier:  ? PAC:27437816
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1301 Theobroma cacao pathologic  
Tcacao PWY-6527 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029930 0.5kb upstream 0.5kb upstream 4492 true scaffold_6: 25006050-25010541 Theobroma cacao
Thecc1EG029930 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25006050-25006549 Theobroma cacao
Thecc1EG029930 0.5kb downstream 0.5kb downstream 4492 true scaffold_6: 25006550-25011041 Theobroma cacao
Thecc1EG029930 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25010542-25011041 Theobroma cacao
Thecc1EG029930 1.0kb upstream 1.0kb upstream 4992 true scaffold_6: 25005550-25010541 Theobroma cacao
Thecc1EG029930 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25005550-25006549 Theobroma cacao
Thecc1EG029930 1.0kb downstream 1.0kb downstream 4992 true scaffold_6: 25006550-25011541 Theobroma cacao
Thecc1EG029930 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25010542-25011541 Theobroma cacao
Thecc1EG029930 2.0kb upstream 2.0kb upstream 5992 true scaffold_6: 25004550-25010541 Theobroma cacao
Thecc1EG029930 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25004550-25006549 Theobroma cacao
Thecc1EG029930 2.0kb downstream 2.0kb downstream 5992 true scaffold_6: 25006550-25012541 Theobroma cacao
Thecc1EG029930 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25010542-25012541 Theobroma cacao
Thecc1EG029930 5.0kb upstream 5.0kb upstream 8992 true scaffold_6: 25001550-25010541 Theobroma cacao
Thecc1EG029930 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25001550-25006549 Theobroma cacao
Thecc1EG029930 5.0kb downstream 5.0kb downstream 8992 true scaffold_6: 25006550-25015541 Theobroma cacao
Thecc1EG029930 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25010542-25015541 Theobroma cacao
Thecc1EG029930 10.0kb upstream 10.0kb upstream 13992 true scaffold_6: 24996550-25010541 Theobroma cacao
Thecc1EG029930 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24996550-25006549 Theobroma cacao
Thecc1EG029930 10.0kb downstream 10.0kb downstream 13992 true scaffold_6: 25006550-25020541 Theobroma cacao
Thecc1EG029930 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25010542-25020541 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824351 5264 Brassicales-Malvales View MSA
124320154 5266 SBM View MSA
124248290 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain