Gene : Thecc1EG029931 T. cacao v1.1
Defline:  (1 of 2) PTHR31719//PTHR31719:SF9 - FAMILY NOT NAMED // ATNAC2-RELATED Genomic Order:  1885
Name:  ? Thecc1EG029931 Secondary Identifier:  ? PAC:27439026
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029931 0.5kb upstream 0.5kb upstream 2488 true scaffold_6: 25013690-25016177 Theobroma cacao
Thecc1EG029931 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25013690-25014189 Theobroma cacao
Thecc1EG029931 0.5kb downstream 0.5kb downstream 2488 true scaffold_6: 25014190-25016677 Theobroma cacao
Thecc1EG029931 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25016178-25016677 Theobroma cacao
Thecc1EG029931 1.0kb upstream 1.0kb upstream 2988 true scaffold_6: 25013190-25016177 Theobroma cacao
Thecc1EG029931 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25013190-25014189 Theobroma cacao
Thecc1EG029931 1.0kb downstream 1.0kb downstream 2988 true scaffold_6: 25014190-25017177 Theobroma cacao
Thecc1EG029931 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25016178-25017177 Theobroma cacao
Thecc1EG029931 2.0kb upstream 2.0kb upstream 3988 true scaffold_6: 25012190-25016177 Theobroma cacao
Thecc1EG029931 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25012190-25014189 Theobroma cacao
Thecc1EG029931 2.0kb downstream 2.0kb downstream 3988 true scaffold_6: 25014190-25018177 Theobroma cacao
Thecc1EG029931 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25016178-25018177 Theobroma cacao
Thecc1EG029931 5.0kb upstream 5.0kb upstream 6988 true scaffold_6: 25009190-25016177 Theobroma cacao
Thecc1EG029931 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25009190-25014189 Theobroma cacao
Thecc1EG029931 5.0kb downstream 5.0kb downstream 6988 true scaffold_6: 25014190-25021177 Theobroma cacao
Thecc1EG029931 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25016178-25021177 Theobroma cacao
Thecc1EG029931 10.0kb upstream 10.0kb upstream 11988 true scaffold_6: 25004190-25016177 Theobroma cacao
Thecc1EG029931 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25004190-25014189 Theobroma cacao
Thecc1EG029931 10.0kb downstream 10.0kb downstream 11988 true scaffold_6: 25014190-25026177 Theobroma cacao
Thecc1EG029931 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25016178-25026177 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826754 5264 Brassicales-Malvales View MSA
124347106 5266 SBM View MSA
124245312 5268 Malvidae View MSA
124065723 5270 Rosid View MSA
123745074 5271 Pentapetalae View MSA
122796583 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain