Gene : Pavir.J238900 P. virgatum v4.1
Defline:  (1 of 3) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Genomic Order:  1
Name:  ? Pavir.J238900 Secondary Identifier:  ? PAC:37602154
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J238900 0.5kb upstream 0.5kb upstream 3402 true scaffold_2043: 10573-13974 Panicum virgatum
Pavir.J238900 0.5kb upstream 0.5kb upstream 500 false scaffold_2043: 10573-11072 Panicum virgatum
Pavir.J238900 0.5kb downstream 0.5kb downstream 3402 true scaffold_2043: 11073-14474 Panicum virgatum
Pavir.J238900 0.5kb downstream 0.5kb downstream 500 false scaffold_2043: 13975-14474 Panicum virgatum
Pavir.J238900 1.0kb upstream 1.0kb upstream 3902 true scaffold_2043: 10073-13974 Panicum virgatum
Pavir.J238900 1.0kb upstream 1.0kb upstream 1000 false scaffold_2043: 10073-11072 Panicum virgatum
Pavir.J238900 1.0kb downstream 1.0kb downstream 3902 true scaffold_2043: 11073-14974 Panicum virgatum
Pavir.J238900 1.0kb downstream 1.0kb downstream 1000 false scaffold_2043: 13975-14974 Panicum virgatum
Pavir.J238900 2.0kb upstream 2.0kb upstream 4902 true scaffold_2043: 9073-13974 Panicum virgatum
Pavir.J238900 2.0kb upstream 2.0kb upstream 2000 false scaffold_2043: 9073-11072 Panicum virgatum
Pavir.J238900 2.0kb downstream 2.0kb downstream 4902 true scaffold_2043: 11073-15974 Panicum virgatum
Pavir.J238900 2.0kb downstream 2.0kb downstream 2000 false scaffold_2043: 13975-15974 Panicum virgatum
Pavir.J238900 5.0kb upstream 5.0kb upstream 7902 true scaffold_2043: 6073-13974 Panicum virgatum
Pavir.J238900 5.0kb upstream 5.0kb upstream 5000 false scaffold_2043: 6073-11072 Panicum virgatum
Pavir.J238900 5.0kb downstream 5.0kb downstream 7902 true scaffold_2043: 11073-18974 Panicum virgatum
Pavir.J238900 5.0kb downstream 5.0kb downstream 5000 false scaffold_2043: 13975-18974 Panicum virgatum
Pavir.J238900 10.0kb upstream 10.0kb upstream 12902 true scaffold_2043: 1073-13974 Panicum virgatum
Pavir.J238900 10.0kb upstream 10.0kb upstream 10000 false scaffold_2043: 1073-11072 Panicum virgatum
Pavir.J238900 10.0kb downstream 10.0kb downstream 8647 true scaffold_2043: 11073-19719 Panicum virgatum
Pavir.J238900 10.0kb downstream 10.0kb downstream 5745 false scaffold_2043: 13975-19719 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189285 5267 Panicoideae View MSA
124569087 5269 Grass View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

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