Gene : Thecc1EG029924 T. cacao v1.1
Defline:  (1 of 8) 1.10.3.1 - Catechol oxidase / Tyrosinase Genomic Order:  1879
Name:  ? Thecc1EG029924 Secondary Identifier:  ? PAC:27440340
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6752 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029924 0.5kb upstream 0.5kb upstream 2714 true scaffold_6: 24951485-24954198 Theobroma cacao
Thecc1EG029924 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24951485-24951984 Theobroma cacao
Thecc1EG029924 0.5kb downstream 0.5kb downstream 2714 true scaffold_6: 24951985-24954698 Theobroma cacao
Thecc1EG029924 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24954199-24954698 Theobroma cacao
Thecc1EG029924 1.0kb upstream 1.0kb upstream 3214 true scaffold_6: 24950985-24954198 Theobroma cacao
Thecc1EG029924 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24950985-24951984 Theobroma cacao
Thecc1EG029924 1.0kb downstream 1.0kb downstream 3214 true scaffold_6: 24951985-24955198 Theobroma cacao
Thecc1EG029924 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24954199-24955198 Theobroma cacao
Thecc1EG029924 2.0kb upstream 2.0kb upstream 4214 true scaffold_6: 24949985-24954198 Theobroma cacao
Thecc1EG029924 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24949985-24951984 Theobroma cacao
Thecc1EG029924 2.0kb downstream 2.0kb downstream 4214 true scaffold_6: 24951985-24956198 Theobroma cacao
Thecc1EG029924 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24954199-24956198 Theobroma cacao
Thecc1EG029924 5.0kb upstream 5.0kb upstream 7214 true scaffold_6: 24946985-24954198 Theobroma cacao
Thecc1EG029924 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24946985-24951984 Theobroma cacao
Thecc1EG029924 5.0kb downstream 5.0kb downstream 7214 true scaffold_6: 24951985-24959198 Theobroma cacao
Thecc1EG029924 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24954199-24959198 Theobroma cacao
Thecc1EG029924 10.0kb upstream 10.0kb upstream 12214 true scaffold_6: 24941985-24954198 Theobroma cacao
Thecc1EG029924 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24941985-24951984 Theobroma cacao
Thecc1EG029924 10.0kb downstream 10.0kb downstream 12214 true scaffold_6: 24951985-24964198 Theobroma cacao
Thecc1EG029924 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24954199-24964198 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031951 5273 Angiosperm View MSA
123826259 5264 Brassicales-Malvales View MSA
124320959 5266 SBM View MSA
124168841 5268 Malvidae View MSA
123892104 5270 Rosid View MSA
123757855 5271 Pentapetalae View MSA
122778868 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain