Gene : Thecc1EG029908 T. cacao v1.1
Defline:  (1 of 2) PTHR10639//PTHR10639:SF8 - CLATHRIN LIGHT CHAIN // SUBFAMILY NOT NAMED Genomic Order:  1863
Name:  ? Thecc1EG029908 Secondary Identifier:  ? PAC:27440288
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029908 0.5kb upstream 0.5kb upstream 3844 true scaffold_6: 24866708-24870551 Theobroma cacao
Thecc1EG029908 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24870052-24870551 Theobroma cacao
Thecc1EG029908 0.5kb downstream 0.5kb downstream 3844 true scaffold_6: 24866208-24870051 Theobroma cacao
Thecc1EG029908 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24866208-24866707 Theobroma cacao
Thecc1EG029908 1.0kb upstream 1.0kb upstream 4344 true scaffold_6: 24866708-24871051 Theobroma cacao
Thecc1EG029908 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24870052-24871051 Theobroma cacao
Thecc1EG029908 1.0kb downstream 1.0kb downstream 4344 true scaffold_6: 24865708-24870051 Theobroma cacao
Thecc1EG029908 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24865708-24866707 Theobroma cacao
Thecc1EG029908 2.0kb upstream 2.0kb upstream 5344 true scaffold_6: 24866708-24872051 Theobroma cacao
Thecc1EG029908 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24870052-24872051 Theobroma cacao
Thecc1EG029908 2.0kb downstream 2.0kb downstream 5344 true scaffold_6: 24864708-24870051 Theobroma cacao
Thecc1EG029908 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24864708-24866707 Theobroma cacao
Thecc1EG029908 5.0kb upstream 5.0kb upstream 8344 true scaffold_6: 24866708-24875051 Theobroma cacao
Thecc1EG029908 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24870052-24875051 Theobroma cacao
Thecc1EG029908 5.0kb downstream 5.0kb downstream 8344 true scaffold_6: 24861708-24870051 Theobroma cacao
Thecc1EG029908 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24861708-24866707 Theobroma cacao
Thecc1EG029908 10.0kb upstream 10.0kb upstream 13344 true scaffold_6: 24866708-24880051 Theobroma cacao
Thecc1EG029908 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24870052-24880051 Theobroma cacao
Thecc1EG029908 10.0kb downstream 10.0kb downstream 13344 true scaffold_6: 24856708-24870051 Theobroma cacao
Thecc1EG029908 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24856708-24866707 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835178 5264 Brassicales-Malvales View MSA
124351247 5266 SBM View MSA
124243938 5268 Malvidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain