Gene : Thecc1EG029897 T. cacao v1.1

Defline:  (1 of 1) PTHR19282//PTHR19282:SF221 - TETRASPANIN // SUBFAMILY NOT NAMED Genomic Order:  1853
Name:  ? Thecc1EG029897 Secondary Identifier:  ? PAC:27439621

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029897 0.5kb upstream 0.5kb upstream 2226 true scaffold_6: 24818726-24820951 Theobroma cacao
Thecc1EG029897 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24818726-24819225 Theobroma cacao
Thecc1EG029897 0.5kb downstream 0.5kb downstream 2226 true scaffold_6: 24819226-24821451 Theobroma cacao
Thecc1EG029897 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24820952-24821451 Theobroma cacao
Thecc1EG029897 1.0kb upstream 1.0kb upstream 2726 true scaffold_6: 24818226-24820951 Theobroma cacao
Thecc1EG029897 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24818226-24819225 Theobroma cacao
Thecc1EG029897 1.0kb downstream 1.0kb downstream 2726 true scaffold_6: 24819226-24821951 Theobroma cacao
Thecc1EG029897 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24820952-24821951 Theobroma cacao
Thecc1EG029897 2.0kb upstream 2.0kb upstream 3726 true scaffold_6: 24817226-24820951 Theobroma cacao
Thecc1EG029897 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24817226-24819225 Theobroma cacao
Thecc1EG029897 2.0kb downstream 2.0kb downstream 3726 true scaffold_6: 24819226-24822951 Theobroma cacao
Thecc1EG029897 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24820952-24822951 Theobroma cacao
Thecc1EG029897 5.0kb upstream 5.0kb upstream 6726 true scaffold_6: 24814226-24820951 Theobroma cacao
Thecc1EG029897 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24814226-24819225 Theobroma cacao
Thecc1EG029897 5.0kb downstream 5.0kb downstream 6726 true scaffold_6: 24819226-24825951 Theobroma cacao
Thecc1EG029897 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24820952-24825951 Theobroma cacao
Thecc1EG029897 10.0kb upstream 10.0kb upstream 11726 true scaffold_6: 24809226-24820951 Theobroma cacao
Thecc1EG029897 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24809226-24819225 Theobroma cacao
Thecc1EG029897 10.0kb downstream 10.0kb downstream 11726 true scaffold_6: 24819226-24830951 Theobroma cacao
Thecc1EG029897 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24820952-24830951 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041111 5273 Angiosperm View MSA
123835713 5264 Brassicales-Malvales View MSA
124350190 5266 SBM View MSA
124247173 5268 Malvidae View MSA
124072815 5270 Rosid View MSA
123745432 5271 Pentapetalae View MSA
122787617 5272 Eudicot View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain