Gene : Thecc1EG029899 T. cacao v1.1
Defline:  (1 of 2) K04712 - sphingolipid delta-4 desaturase (DEGS) Genomic Order:  1854
Name:  ? Thecc1EG029899 Secondary Identifier:  ? PAC:27438036
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029899 0.5kb upstream 0.5kb upstream 3281 true scaffold_6: 24820756-24824036 Theobroma cacao
Thecc1EG029899 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24823537-24824036 Theobroma cacao
Thecc1EG029899 0.5kb downstream 0.5kb downstream 3281 true scaffold_6: 24820256-24823536 Theobroma cacao
Thecc1EG029899 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24820256-24820755 Theobroma cacao
Thecc1EG029899 1.0kb upstream 1.0kb upstream 3781 true scaffold_6: 24820756-24824536 Theobroma cacao
Thecc1EG029899 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24823537-24824536 Theobroma cacao
Thecc1EG029899 1.0kb downstream 1.0kb downstream 3781 true scaffold_6: 24819756-24823536 Theobroma cacao
Thecc1EG029899 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24819756-24820755 Theobroma cacao
Thecc1EG029899 2.0kb upstream 2.0kb upstream 4781 true scaffold_6: 24820756-24825536 Theobroma cacao
Thecc1EG029899 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24823537-24825536 Theobroma cacao
Thecc1EG029899 2.0kb downstream 2.0kb downstream 4781 true scaffold_6: 24818756-24823536 Theobroma cacao
Thecc1EG029899 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24818756-24820755 Theobroma cacao
Thecc1EG029899 5.0kb upstream 5.0kb upstream 7781 true scaffold_6: 24820756-24828536 Theobroma cacao
Thecc1EG029899 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24823537-24828536 Theobroma cacao
Thecc1EG029899 5.0kb downstream 5.0kb downstream 7781 true scaffold_6: 24815756-24823536 Theobroma cacao
Thecc1EG029899 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24815756-24820755 Theobroma cacao
Thecc1EG029899 10.0kb upstream 10.0kb upstream 12781 true scaffold_6: 24820756-24833536 Theobroma cacao
Thecc1EG029899 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24823537-24833536 Theobroma cacao
Thecc1EG029899 10.0kb downstream 10.0kb downstream 12781 true scaffold_6: 24810756-24823536 Theobroma cacao
Thecc1EG029899 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24810756-24820755 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836824 5264 Brassicales-Malvales View MSA
124350792 5266 SBM View MSA
124246231 5268 Malvidae View MSA
124069384 5270 Rosid View MSA
123741944 5271 Pentapetalae View MSA
122796748 5272 Eudicot View MSA
122048709 5273 Angiosperm View MSA
121348431 5274 Embryophyte View MSA
123425717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain