Gene : Thecc1EG029887 T. cacao v1.1

Defline:  (1 of 1) PTHR10293//PTHR10293:SF40 - GLUTAREDOXIN-RELATED PROTEIN // GLUTAREDOXIN-3 Genomic Order:  1845
Name:  ? Thecc1EG029887 Secondary Identifier:  ? PAC:27439140

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029887 0.5kb upstream 0.5kb upstream 3703 true scaffold_6: 24782396-24786098 Theobroma cacao
Thecc1EG029887 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24785599-24786098 Theobroma cacao
Thecc1EG029887 0.5kb downstream 0.5kb downstream 3703 true scaffold_6: 24781896-24785598 Theobroma cacao
Thecc1EG029887 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24781896-24782395 Theobroma cacao
Thecc1EG029887 1.0kb upstream 1.0kb upstream 4203 true scaffold_6: 24782396-24786598 Theobroma cacao
Thecc1EG029887 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24785599-24786598 Theobroma cacao
Thecc1EG029887 1.0kb downstream 1.0kb downstream 4203 true scaffold_6: 24781396-24785598 Theobroma cacao
Thecc1EG029887 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24781396-24782395 Theobroma cacao
Thecc1EG029887 2.0kb upstream 2.0kb upstream 5203 true scaffold_6: 24782396-24787598 Theobroma cacao
Thecc1EG029887 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24785599-24787598 Theobroma cacao
Thecc1EG029887 2.0kb downstream 2.0kb downstream 5203 true scaffold_6: 24780396-24785598 Theobroma cacao
Thecc1EG029887 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24780396-24782395 Theobroma cacao
Thecc1EG029887 5.0kb upstream 5.0kb upstream 8203 true scaffold_6: 24782396-24790598 Theobroma cacao
Thecc1EG029887 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24785599-24790598 Theobroma cacao
Thecc1EG029887 5.0kb downstream 5.0kb downstream 8203 true scaffold_6: 24777396-24785598 Theobroma cacao
Thecc1EG029887 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24777396-24782395 Theobroma cacao
Thecc1EG029887 10.0kb upstream 10.0kb upstream 13203 true scaffold_6: 24782396-24795598 Theobroma cacao
Thecc1EG029887 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24785599-24795598 Theobroma cacao
Thecc1EG029887 10.0kb downstream 10.0kb downstream 13203 true scaffold_6: 24772396-24785598 Theobroma cacao
Thecc1EG029887 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24772396-24782395 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040872 5273 Angiosperm View MSA
123833398 5264 Brassicales-Malvales View MSA
124341803 5266 SBM View MSA
124243342 5268 Malvidae View MSA
124062011 5270 Rosid View MSA
123737544 5271 Pentapetalae View MSA
122791551 5272 Eudicot View MSA
121349361 5274 Embryophyte View MSA
123428692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain