Gene : Pavir.1NG280200 P. virgatum v4.1
Defline:  (1 of 3) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  2540
Name:  ? Pavir.1NG280200 Secondary Identifier:  ? PAC:37609668
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5936 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG280200 0.5kb upstream 0.5kb upstream 1937 true Chr01N: 67437916-67439852 Panicum virgatum
Pavir.1NG280200 0.5kb upstream 0.5kb upstream 500 false Chr01N: 67439353-67439852 Panicum virgatum
Pavir.1NG280200 0.5kb downstream 0.5kb downstream 1937 true Chr01N: 67437416-67439352 Panicum virgatum
Pavir.1NG280200 0.5kb downstream 0.5kb downstream 500 false Chr01N: 67437416-67437915 Panicum virgatum
Pavir.1NG280200 1.0kb upstream 1.0kb upstream 2437 true Chr01N: 67437916-67440352 Panicum virgatum
Pavir.1NG280200 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 67439353-67440352 Panicum virgatum
Pavir.1NG280200 1.0kb downstream 1.0kb downstream 2437 true Chr01N: 67436916-67439352 Panicum virgatum
Pavir.1NG280200 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 67436916-67437915 Panicum virgatum
Pavir.1NG280200 2.0kb upstream 2.0kb upstream 3437 true Chr01N: 67437916-67441352 Panicum virgatum
Pavir.1NG280200 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 67439353-67441352 Panicum virgatum
Pavir.1NG280200 2.0kb downstream 2.0kb downstream 3437 true Chr01N: 67435916-67439352 Panicum virgatum
Pavir.1NG280200 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 67435916-67437915 Panicum virgatum
Pavir.1NG280200 5.0kb upstream 5.0kb upstream 6437 true Chr01N: 67437916-67444352 Panicum virgatum
Pavir.1NG280200 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 67439353-67444352 Panicum virgatum
Pavir.1NG280200 5.0kb downstream 5.0kb downstream 6437 true Chr01N: 67432916-67439352 Panicum virgatum
Pavir.1NG280200 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 67432916-67437915 Panicum virgatum
Pavir.1NG280200 10.0kb upstream 10.0kb upstream 11437 true Chr01N: 67437916-67449352 Panicum virgatum
Pavir.1NG280200 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 67439353-67449352 Panicum virgatum
Pavir.1NG280200 10.0kb downstream 10.0kb downstream 11437 true Chr01N: 67427916-67439352 Panicum virgatum
Pavir.1NG280200 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 67427916-67437915 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188249 5267 Panicoideae View MSA
124583010 5269 Grass View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain