Gene : Pavir.1NG445600 P. virgatum v4.1
Defline:  (1 of 3) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  3174
Name:  ? Pavir.1NG445600 Secondary Identifier:  ? PAC:37614260
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARGSYNBSUB-PWY Panicum virgatum pathologic  
Pvirgatum ARGSYN-PWY Panicum virgatum pathologic  
Pvirgatum CITRULBIO-PWY Panicum virgatum pathologic  
Pvirgatum CITRULLINE-DEG-PWY Panicum virgatum pathologic  
Pvirgatum PWY-4984 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG445600 0.5kb upstream 0.5kb upstream 6500 true Chr01N: 74427887-74434386 Panicum virgatum
Pavir.1NG445600 0.5kb upstream 0.5kb upstream 500 false Chr01N: 74427887-74428386 Panicum virgatum
Pavir.1NG445600 0.5kb downstream 0.5kb downstream 6500 true Chr01N: 74428387-74434886 Panicum virgatum
Pavir.1NG445600 0.5kb downstream 0.5kb downstream 500 false Chr01N: 74434387-74434886 Panicum virgatum
Pavir.1NG445600 1.0kb upstream 1.0kb upstream 7000 true Chr01N: 74427387-74434386 Panicum virgatum
Pavir.1NG445600 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 74427387-74428386 Panicum virgatum
Pavir.1NG445600 1.0kb downstream 1.0kb downstream 7000 true Chr01N: 74428387-74435386 Panicum virgatum
Pavir.1NG445600 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 74434387-74435386 Panicum virgatum
Pavir.1NG445600 2.0kb upstream 2.0kb upstream 8000 true Chr01N: 74426387-74434386 Panicum virgatum
Pavir.1NG445600 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 74426387-74428386 Panicum virgatum
Pavir.1NG445600 2.0kb downstream 2.0kb downstream 8000 true Chr01N: 74428387-74436386 Panicum virgatum
Pavir.1NG445600 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 74434387-74436386 Panicum virgatum
Pavir.1NG445600 5.0kb upstream 5.0kb upstream 11000 true Chr01N: 74423387-74434386 Panicum virgatum
Pavir.1NG445600 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 74423387-74428386 Panicum virgatum
Pavir.1NG445600 5.0kb downstream 5.0kb downstream 11000 true Chr01N: 74428387-74439386 Panicum virgatum
Pavir.1NG445600 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 74434387-74439386 Panicum virgatum
Pavir.1NG445600 10.0kb upstream 10.0kb upstream 16000 true Chr01N: 74418387-74434386 Panicum virgatum
Pavir.1NG445600 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 74418387-74428386 Panicum virgatum
Pavir.1NG445600 10.0kb downstream 10.0kb downstream 16000 true Chr01N: 74428387-74444386 Panicum virgatum
Pavir.1NG445600 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 74434387-74444386 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175374 5267 Panicoideae View MSA
124573214 5269 Grass View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain