Gene : Pavir.1NG449200 P. virgatum v4.1
Defline:  (1 of 3) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  3876
Name:  ? Pavir.1NG449200 Secondary Identifier:  ? PAC:37615919
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum ARGSYNBSUB-PWY Panicum virgatum pathologic  
Pvirgatum ARGSYN-PWY Panicum virgatum pathologic  
Pvirgatum CITRULBIO-PWY Panicum virgatum pathologic  
Pvirgatum CITRULLINE-DEG-PWY Panicum virgatum pathologic  
Pvirgatum PWY-4984 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG449200 0.5kb upstream 0.5kb upstream 4031 true Chr01N: 83827752-83831782 Panicum virgatum
Pavir.1NG449200 0.5kb upstream 0.5kb upstream 500 false Chr01N: 83827752-83828251 Panicum virgatum
Pavir.1NG449200 0.5kb downstream 0.5kb downstream 4031 true Chr01N: 83828252-83832282 Panicum virgatum
Pavir.1NG449200 0.5kb downstream 0.5kb downstream 500 false Chr01N: 83831783-83832282 Panicum virgatum
Pavir.1NG449200 1.0kb upstream 1.0kb upstream 4531 true Chr01N: 83827252-83831782 Panicum virgatum
Pavir.1NG449200 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 83827252-83828251 Panicum virgatum
Pavir.1NG449200 1.0kb downstream 1.0kb downstream 4531 true Chr01N: 83828252-83832782 Panicum virgatum
Pavir.1NG449200 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 83831783-83832782 Panicum virgatum
Pavir.1NG449200 2.0kb upstream 2.0kb upstream 5531 true Chr01N: 83826252-83831782 Panicum virgatum
Pavir.1NG449200 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 83826252-83828251 Panicum virgatum
Pavir.1NG449200 2.0kb downstream 2.0kb downstream 5531 true Chr01N: 83828252-83833782 Panicum virgatum
Pavir.1NG449200 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 83831783-83833782 Panicum virgatum
Pavir.1NG449200 5.0kb upstream 5.0kb upstream 8531 true Chr01N: 83823252-83831782 Panicum virgatum
Pavir.1NG449200 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 83823252-83828251 Panicum virgatum
Pavir.1NG449200 5.0kb downstream 5.0kb downstream 8531 true Chr01N: 83828252-83836782 Panicum virgatum
Pavir.1NG449200 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 83831783-83836782 Panicum virgatum
Pavir.1NG449200 10.0kb upstream 10.0kb upstream 13531 true Chr01N: 83818252-83831782 Panicum virgatum
Pavir.1NG449200 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 83818252-83828251 Panicum virgatum
Pavir.1NG449200 10.0kb downstream 10.0kb downstream 13531 true Chr01N: 83828252-83841782 Panicum virgatum
Pavir.1NG449200 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 83831783-83841782 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175374 5267 Panicoideae View MSA
124573214 5269 Grass View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain