Gene : Thecc1EG030206 T. cacao v1.1
Defline:  F-box family protein (66%P) Genomic Order:  2117
Name:  ? Thecc1EG030206 Secondary Identifier:  ? PAC:27438154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030206 0.5kb upstream 0.5kb upstream 1337 true scaffold_6: 26192640-26193976 Theobroma cacao
Thecc1EG030206 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26192640-26193139 Theobroma cacao
Thecc1EG030206 0.5kb downstream 0.5kb downstream 1337 true scaffold_6: 26193140-26194476 Theobroma cacao
Thecc1EG030206 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26193977-26194476 Theobroma cacao
Thecc1EG030206 1.0kb upstream 1.0kb upstream 1837 true scaffold_6: 26192140-26193976 Theobroma cacao
Thecc1EG030206 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26192140-26193139 Theobroma cacao
Thecc1EG030206 1.0kb downstream 1.0kb downstream 1837 true scaffold_6: 26193140-26194976 Theobroma cacao
Thecc1EG030206 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26193977-26194976 Theobroma cacao
Thecc1EG030206 2.0kb upstream 2.0kb upstream 2837 true scaffold_6: 26191140-26193976 Theobroma cacao
Thecc1EG030206 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26191140-26193139 Theobroma cacao
Thecc1EG030206 2.0kb downstream 2.0kb downstream 2837 true scaffold_6: 26193140-26195976 Theobroma cacao
Thecc1EG030206 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26193977-26195976 Theobroma cacao
Thecc1EG030206 5.0kb upstream 5.0kb upstream 5837 true scaffold_6: 26188140-26193976 Theobroma cacao
Thecc1EG030206 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26188140-26193139 Theobroma cacao
Thecc1EG030206 5.0kb downstream 5.0kb downstream 5837 true scaffold_6: 26193140-26198976 Theobroma cacao
Thecc1EG030206 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26193977-26198976 Theobroma cacao
Thecc1EG030206 10.0kb upstream 10.0kb upstream 10837 true scaffold_6: 26183140-26193976 Theobroma cacao
Thecc1EG030206 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26183140-26193139 Theobroma cacao
Thecc1EG030206 10.0kb downstream 10.0kb downstream 10837 true scaffold_6: 26193140-26203976 Theobroma cacao
Thecc1EG030206 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26193977-26203976 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028582 5273 Angiosperm View MSA
123837269 5264 Brassicales-Malvales View MSA
124322278 5266 SBM View MSA
124252206 5268 Malvidae View MSA
124051205 5270 Rosid View MSA
123747881 5271 Pentapetalae View MSA
122797596 5272 Eudicot View MSA
121298047 5274 Embryophyte View MSA
123336050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain