Gene : Pavir.1NG425600 P. virgatum v4.1
Defline:  (1 of 369) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3705
Name:  ? Pavir.1NG425600 Secondary Identifier:  ? PAC:37608604
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG425600 0.5kb upstream 0.5kb upstream 7520 true Chr01N: 82055750-82063269 Panicum virgatum
Pavir.1NG425600 0.5kb upstream 0.5kb upstream 500 false Chr01N: 82062770-82063269 Panicum virgatum
Pavir.1NG425600 0.5kb downstream 0.5kb downstream 7520 true Chr01N: 82055250-82062769 Panicum virgatum
Pavir.1NG425600 0.5kb downstream 0.5kb downstream 500 false Chr01N: 82055250-82055749 Panicum virgatum
Pavir.1NG425600 1.0kb upstream 1.0kb upstream 8020 true Chr01N: 82055750-82063769 Panicum virgatum
Pavir.1NG425600 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 82062770-82063769 Panicum virgatum
Pavir.1NG425600 1.0kb downstream 1.0kb downstream 8020 true Chr01N: 82054750-82062769 Panicum virgatum
Pavir.1NG425600 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 82054750-82055749 Panicum virgatum
Pavir.1NG425600 2.0kb upstream 2.0kb upstream 9020 true Chr01N: 82055750-82064769 Panicum virgatum
Pavir.1NG425600 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 82062770-82064769 Panicum virgatum
Pavir.1NG425600 2.0kb downstream 2.0kb downstream 9020 true Chr01N: 82053750-82062769 Panicum virgatum
Pavir.1NG425600 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 82053750-82055749 Panicum virgatum
Pavir.1NG425600 5.0kb upstream 5.0kb upstream 12020 true Chr01N: 82055750-82067769 Panicum virgatum
Pavir.1NG425600 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 82062770-82067769 Panicum virgatum
Pavir.1NG425600 5.0kb downstream 5.0kb downstream 12020 true Chr01N: 82050750-82062769 Panicum virgatum
Pavir.1NG425600 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 82050750-82055749 Panicum virgatum
Pavir.1NG425600 10.0kb upstream 10.0kb upstream 17020 true Chr01N: 82055750-82072769 Panicum virgatum
Pavir.1NG425600 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 82062770-82072769 Panicum virgatum
Pavir.1NG425600 10.0kb downstream 10.0kb downstream 17020 true Chr01N: 82045750-82062769 Panicum virgatum
Pavir.1NG425600 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 82045750-82055749 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122088013 5267 Panicoideae Singleton cluster - no MSA
124587495 5269 Grass View MSA
122041559 5273 Angiosperm View MSA
121309863 5274 Embryophyte View MSA
123347506 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain