Gene : Pavir.1NG378000 P. virgatum v4.1
Defline:  (1 of 3) K05607 - methylglutaconyl-CoA hydratase (AUH) Genomic Order:  3463
Name:  ? Pavir.1NG378000 Secondary Identifier:  ? PAC:37611261
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum LEU-DEG2-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG378000 0.5kb upstream 0.5kb upstream 9439 true Chr01N: 77576716-77586154 Panicum virgatum
Pavir.1NG378000 0.5kb upstream 0.5kb upstream 500 false Chr01N: 77576716-77577215 Panicum virgatum
Pavir.1NG378000 0.5kb downstream 0.5kb downstream 9439 true Chr01N: 77577216-77586654 Panicum virgatum
Pavir.1NG378000 0.5kb downstream 0.5kb downstream 500 false Chr01N: 77586155-77586654 Panicum virgatum
Pavir.1NG378000 1.0kb upstream 1.0kb upstream 9939 true Chr01N: 77576216-77586154 Panicum virgatum
Pavir.1NG378000 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 77576216-77577215 Panicum virgatum
Pavir.1NG378000 1.0kb downstream 1.0kb downstream 9939 true Chr01N: 77577216-77587154 Panicum virgatum
Pavir.1NG378000 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 77586155-77587154 Panicum virgatum
Pavir.1NG378000 2.0kb upstream 2.0kb upstream 10939 true Chr01N: 77575216-77586154 Panicum virgatum
Pavir.1NG378000 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 77575216-77577215 Panicum virgatum
Pavir.1NG378000 2.0kb downstream 2.0kb downstream 10939 true Chr01N: 77577216-77588154 Panicum virgatum
Pavir.1NG378000 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 77586155-77588154 Panicum virgatum
Pavir.1NG378000 5.0kb upstream 5.0kb upstream 13939 true Chr01N: 77572216-77586154 Panicum virgatum
Pavir.1NG378000 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 77572216-77577215 Panicum virgatum
Pavir.1NG378000 5.0kb downstream 5.0kb downstream 13939 true Chr01N: 77577216-77591154 Panicum virgatum
Pavir.1NG378000 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 77586155-77591154 Panicum virgatum
Pavir.1NG378000 10.0kb upstream 10.0kb upstream 18939 true Chr01N: 77567216-77586154 Panicum virgatum
Pavir.1NG378000 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 77567216-77577215 Panicum virgatum
Pavir.1NG378000 10.0kb downstream 10.0kb downstream 18939 true Chr01N: 77577216-77596154 Panicum virgatum
Pavir.1NG378000 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 77586155-77596154 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994710 5273 Angiosperm View MSA
122195926 5267 Panicoideae View MSA
124585375 5269 Grass View MSA
121264927 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain