Gene : Pavir.1NG380700 P. virgatum v4.1
Defline:  (1 of 1) K04715 - ceramide kinase (E2.7.1.138, CERK) Genomic Order:  3488
Name:  ? Pavir.1NG380700 Secondary Identifier:  ? PAC:37613985
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5129 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG380700 0.5kb upstream 0.5kb upstream 10073 true Chr01N: 77807060-77817132 Panicum virgatum
Pavir.1NG380700 0.5kb upstream 0.5kb upstream 500 false Chr01N: 77816633-77817132 Panicum virgatum
Pavir.1NG380700 0.5kb downstream 0.5kb downstream 10073 true Chr01N: 77806560-77816632 Panicum virgatum
Pavir.1NG380700 0.5kb downstream 0.5kb downstream 500 false Chr01N: 77806560-77807059 Panicum virgatum
Pavir.1NG380700 1.0kb upstream 1.0kb upstream 10573 true Chr01N: 77807060-77817632 Panicum virgatum
Pavir.1NG380700 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 77816633-77817632 Panicum virgatum
Pavir.1NG380700 1.0kb downstream 1.0kb downstream 10573 true Chr01N: 77806060-77816632 Panicum virgatum
Pavir.1NG380700 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 77806060-77807059 Panicum virgatum
Pavir.1NG380700 2.0kb upstream 2.0kb upstream 11573 true Chr01N: 77807060-77818632 Panicum virgatum
Pavir.1NG380700 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 77816633-77818632 Panicum virgatum
Pavir.1NG380700 2.0kb downstream 2.0kb downstream 11573 true Chr01N: 77805060-77816632 Panicum virgatum
Pavir.1NG380700 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 77805060-77807059 Panicum virgatum
Pavir.1NG380700 5.0kb upstream 5.0kb upstream 14573 true Chr01N: 77807060-77821632 Panicum virgatum
Pavir.1NG380700 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 77816633-77821632 Panicum virgatum
Pavir.1NG380700 5.0kb downstream 5.0kb downstream 14573 true Chr01N: 77802060-77816632 Panicum virgatum
Pavir.1NG380700 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 77802060-77807059 Panicum virgatum
Pavir.1NG380700 10.0kb upstream 10.0kb upstream 19573 true Chr01N: 77807060-77826632 Panicum virgatum
Pavir.1NG380700 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 77816633-77826632 Panicum virgatum
Pavir.1NG380700 10.0kb downstream 10.0kb downstream 19573 true Chr01N: 77797060-77816632 Panicum virgatum
Pavir.1NG380700 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 77797060-77807059 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188498 5267 Panicoideae View MSA
124580851 5269 Grass View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain