Gene : Thecc1EG030082 T. cacao v1.1
Defline:  (1 of 3) PTHR23042//PTHR23042:SF67 - CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS // TRANSCRIPTION FACTOR ILR3-RELATED Genomic Order:  2025
Name:  ? Thecc1EG030082 Secondary Identifier:  ? PAC:27437907
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030082 0.5kb upstream 0.5kb upstream 2797 true scaffold_6: 25727821-25730617 Theobroma cacao
Thecc1EG030082 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25727821-25728320 Theobroma cacao
Thecc1EG030082 0.5kb downstream 0.5kb downstream 2797 true scaffold_6: 25728321-25731117 Theobroma cacao
Thecc1EG030082 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25730618-25731117 Theobroma cacao
Thecc1EG030082 1.0kb upstream 1.0kb upstream 3297 true scaffold_6: 25727321-25730617 Theobroma cacao
Thecc1EG030082 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25727321-25728320 Theobroma cacao
Thecc1EG030082 1.0kb downstream 1.0kb downstream 3297 true scaffold_6: 25728321-25731617 Theobroma cacao
Thecc1EG030082 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25730618-25731617 Theobroma cacao
Thecc1EG030082 2.0kb upstream 2.0kb upstream 4297 true scaffold_6: 25726321-25730617 Theobroma cacao
Thecc1EG030082 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25726321-25728320 Theobroma cacao
Thecc1EG030082 2.0kb downstream 2.0kb downstream 4297 true scaffold_6: 25728321-25732617 Theobroma cacao
Thecc1EG030082 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25730618-25732617 Theobroma cacao
Thecc1EG030082 5.0kb upstream 5.0kb upstream 7297 true scaffold_6: 25723321-25730617 Theobroma cacao
Thecc1EG030082 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25723321-25728320 Theobroma cacao
Thecc1EG030082 5.0kb downstream 5.0kb downstream 7297 true scaffold_6: 25728321-25735617 Theobroma cacao
Thecc1EG030082 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25730618-25735617 Theobroma cacao
Thecc1EG030082 10.0kb upstream 10.0kb upstream 12297 true scaffold_6: 25718321-25730617 Theobroma cacao
Thecc1EG030082 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25718321-25728320 Theobroma cacao
Thecc1EG030082 10.0kb downstream 10.0kb downstream 12297 true scaffold_6: 25728321-25740617 Theobroma cacao
Thecc1EG030082 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25730618-25740617 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825962 5264 Brassicales-Malvales View MSA
124349258 5266 SBM View MSA
124246357 5268 Malvidae View MSA
124074180 5270 Rosid View MSA
123746573 5271 Pentapetalae View MSA
122797303 5272 Eudicot View MSA
122049965 5273 Angiosperm View MSA
121349797 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain