Gene : Pavir.1NG525500 P. virgatum v4.1
Defline:  (1 of 3) K01870 - isoleucyl-tRNA synthetase (IARS, ileS) Genomic Order:  4486
Name:  ? Pavir.1NG525500 Secondary Identifier:  ? PAC:37613916
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG525500 0.5kb upstream 0.5kb upstream 10522 true Chr01N: 91150433-91160954 Panicum virgatum
Pavir.1NG525500 0.5kb upstream 0.5kb upstream 500 false Chr01N: 91150433-91150932 Panicum virgatum
Pavir.1NG525500 0.5kb downstream 0.5kb downstream 10522 true Chr01N: 91150933-91161454 Panicum virgatum
Pavir.1NG525500 0.5kb downstream 0.5kb downstream 500 false Chr01N: 91160955-91161454 Panicum virgatum
Pavir.1NG525500 1.0kb upstream 1.0kb upstream 11022 true Chr01N: 91149933-91160954 Panicum virgatum
Pavir.1NG525500 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 91149933-91150932 Panicum virgatum
Pavir.1NG525500 1.0kb downstream 1.0kb downstream 11022 true Chr01N: 91150933-91161954 Panicum virgatum
Pavir.1NG525500 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 91160955-91161954 Panicum virgatum
Pavir.1NG525500 2.0kb upstream 2.0kb upstream 12022 true Chr01N: 91148933-91160954 Panicum virgatum
Pavir.1NG525500 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 91148933-91150932 Panicum virgatum
Pavir.1NG525500 2.0kb downstream 2.0kb downstream 12022 true Chr01N: 91150933-91162954 Panicum virgatum
Pavir.1NG525500 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 91160955-91162954 Panicum virgatum
Pavir.1NG525500 5.0kb upstream 5.0kb upstream 15022 true Chr01N: 91145933-91160954 Panicum virgatum
Pavir.1NG525500 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 91145933-91150932 Panicum virgatum
Pavir.1NG525500 5.0kb downstream 5.0kb downstream 15022 true Chr01N: 91150933-91165954 Panicum virgatum
Pavir.1NG525500 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 91160955-91165954 Panicum virgatum
Pavir.1NG525500 10.0kb upstream 10.0kb upstream 20022 true Chr01N: 91140933-91160954 Panicum virgatum
Pavir.1NG525500 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 91140933-91150932 Panicum virgatum
Pavir.1NG525500 10.0kb downstream 10.0kb downstream 20022 true Chr01N: 91150933-91170954 Panicum virgatum
Pavir.1NG525500 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 91160955-91170954 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185947 5267 Panicoideae View MSA
124573656 5269 Grass View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain