Gene : Thecc1EG030058 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2004
Name:  ? Thecc1EG030058 Secondary Identifier:  ? PAC:27438240
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030058 0.5kb upstream 0.5kb upstream 2394 true scaffold_6: 25593998-25596391 Theobroma cacao
Thecc1EG030058 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25593998-25594497 Theobroma cacao
Thecc1EG030058 0.5kb downstream 0.5kb downstream 2394 true scaffold_6: 25594498-25596891 Theobroma cacao
Thecc1EG030058 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25596392-25596891 Theobroma cacao
Thecc1EG030058 1.0kb upstream 1.0kb upstream 2894 true scaffold_6: 25593498-25596391 Theobroma cacao
Thecc1EG030058 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25593498-25594497 Theobroma cacao
Thecc1EG030058 1.0kb downstream 1.0kb downstream 2894 true scaffold_6: 25594498-25597391 Theobroma cacao
Thecc1EG030058 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25596392-25597391 Theobroma cacao
Thecc1EG030058 2.0kb upstream 2.0kb upstream 3894 true scaffold_6: 25592498-25596391 Theobroma cacao
Thecc1EG030058 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25592498-25594497 Theobroma cacao
Thecc1EG030058 2.0kb downstream 2.0kb downstream 3894 true scaffold_6: 25594498-25598391 Theobroma cacao
Thecc1EG030058 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25596392-25598391 Theobroma cacao
Thecc1EG030058 5.0kb upstream 5.0kb upstream 6894 true scaffold_6: 25589498-25596391 Theobroma cacao
Thecc1EG030058 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25589498-25594497 Theobroma cacao
Thecc1EG030058 5.0kb downstream 5.0kb downstream 6894 true scaffold_6: 25594498-25601391 Theobroma cacao
Thecc1EG030058 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25596392-25601391 Theobroma cacao
Thecc1EG030058 10.0kb upstream 10.0kb upstream 11894 true scaffold_6: 25584498-25596391 Theobroma cacao
Thecc1EG030058 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25584498-25594497 Theobroma cacao
Thecc1EG030058 10.0kb downstream 10.0kb downstream 11894 true scaffold_6: 25594498-25606391 Theobroma cacao
Thecc1EG030058 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25596392-25606391 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838641 5264 Brassicales-Malvales View MSA
124322483 5266 SBM View MSA
124244807 5268 Malvidae View MSA
124071286 5270 Rosid View MSA
123743446 5271 Pentapetalae View MSA
122788248 5272 Eudicot View MSA
122047755 5273 Angiosperm View MSA
121310787 5274 Embryophyte View MSA
123348188 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain