Gene : Thecc1EG030070 T. cacao v1.1
Defline:  (1 of 1) K14173 - alpha-farnesene synthase (AFS1) Genomic Order:  2013
Name:  ? Thecc1EG030070 Secondary Identifier:  ? PAC:27440506
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030070 0.5kb upstream 0.5kb upstream 7072 true scaffold_6: 25687867-25694938 Theobroma cacao
Thecc1EG030070 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25694439-25694938 Theobroma cacao
Thecc1EG030070 0.5kb downstream 0.5kb downstream 7072 true scaffold_6: 25687367-25694438 Theobroma cacao
Thecc1EG030070 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25687367-25687866 Theobroma cacao
Thecc1EG030070 1.0kb upstream 1.0kb upstream 7572 true scaffold_6: 25687867-25695438 Theobroma cacao
Thecc1EG030070 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25694439-25695438 Theobroma cacao
Thecc1EG030070 1.0kb downstream 1.0kb downstream 7572 true scaffold_6: 25686867-25694438 Theobroma cacao
Thecc1EG030070 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25686867-25687866 Theobroma cacao
Thecc1EG030070 2.0kb upstream 2.0kb upstream 8572 true scaffold_6: 25687867-25696438 Theobroma cacao
Thecc1EG030070 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25694439-25696438 Theobroma cacao
Thecc1EG030070 2.0kb downstream 2.0kb downstream 8572 true scaffold_6: 25685867-25694438 Theobroma cacao
Thecc1EG030070 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25685867-25687866 Theobroma cacao
Thecc1EG030070 5.0kb upstream 5.0kb upstream 11572 true scaffold_6: 25687867-25699438 Theobroma cacao
Thecc1EG030070 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25694439-25699438 Theobroma cacao
Thecc1EG030070 5.0kb downstream 5.0kb downstream 11572 true scaffold_6: 25682867-25694438 Theobroma cacao
Thecc1EG030070 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25682867-25687866 Theobroma cacao
Thecc1EG030070 10.0kb upstream 10.0kb upstream 16572 true scaffold_6: 25687867-25704438 Theobroma cacao
Thecc1EG030070 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25694439-25704438 Theobroma cacao
Thecc1EG030070 10.0kb downstream 10.0kb downstream 16572 true scaffold_6: 25677867-25694438 Theobroma cacao
Thecc1EG030070 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25677867-25687866 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826375 5264 Brassicales-Malvales View MSA
124348177 5266 SBM View MSA
124254018 5268 Malvidae View MSA
124074530 5270 Rosid View MSA
123753426 5271 Pentapetalae View MSA
122797901 5272 Eudicot View MSA
122051661 5273 Angiosperm View MSA
121351720 5274 Embryophyte View MSA
123382290 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain