Gene : Thecc1EG030049 T. cacao v1.1
Defline:  (1 of 5) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) Genomic Order:  1996
Name:  ? Thecc1EG030049 Secondary Identifier:  ? PAC:27438624
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7279 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030049 0.5kb upstream 0.5kb upstream 3797 true scaffold_6: 25559583-25563379 Theobroma cacao
Thecc1EG030049 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25559583-25560082 Theobroma cacao
Thecc1EG030049 0.5kb downstream 0.5kb downstream 3797 true scaffold_6: 25560083-25563879 Theobroma cacao
Thecc1EG030049 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25563380-25563879 Theobroma cacao
Thecc1EG030049 1.0kb upstream 1.0kb upstream 4297 true scaffold_6: 25559083-25563379 Theobroma cacao
Thecc1EG030049 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25559083-25560082 Theobroma cacao
Thecc1EG030049 1.0kb downstream 1.0kb downstream 4297 true scaffold_6: 25560083-25564379 Theobroma cacao
Thecc1EG030049 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25563380-25564379 Theobroma cacao
Thecc1EG030049 2.0kb upstream 2.0kb upstream 5297 true scaffold_6: 25558083-25563379 Theobroma cacao
Thecc1EG030049 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25558083-25560082 Theobroma cacao
Thecc1EG030049 2.0kb downstream 2.0kb downstream 5297 true scaffold_6: 25560083-25565379 Theobroma cacao
Thecc1EG030049 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25563380-25565379 Theobroma cacao
Thecc1EG030049 5.0kb upstream 5.0kb upstream 8297 true scaffold_6: 25555083-25563379 Theobroma cacao
Thecc1EG030049 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25555083-25560082 Theobroma cacao
Thecc1EG030049 5.0kb downstream 5.0kb downstream 8297 true scaffold_6: 25560083-25568379 Theobroma cacao
Thecc1EG030049 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25563380-25568379 Theobroma cacao
Thecc1EG030049 10.0kb upstream 10.0kb upstream 13297 true scaffold_6: 25550083-25563379 Theobroma cacao
Thecc1EG030049 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25550083-25560082 Theobroma cacao
Thecc1EG030049 10.0kb downstream 10.0kb downstream 13297 true scaffold_6: 25560083-25573379 Theobroma cacao
Thecc1EG030049 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25563380-25573379 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837779 5264 Brassicales-Malvales View MSA
124349421 5266 SBM View MSA
124247600 5268 Malvidae View MSA
124066507 5270 Rosid View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain