Gene : Thecc1EG030028 T. cacao v1.1
Defline:  (1 of 19) PF00954//PF01453//PF07714//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  1976
Name:  ? Thecc1EG030028 Secondary Identifier:  ? PAC:27440840
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030028 0.5kb upstream 0.5kb upstream 7632 true scaffold_6: 25463656-25471287 Theobroma cacao
Thecc1EG030028 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 25463656-25464155 Theobroma cacao
Thecc1EG030028 0.5kb downstream 0.5kb downstream 7632 true scaffold_6: 25464156-25471787 Theobroma cacao
Thecc1EG030028 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 25471288-25471787 Theobroma cacao
Thecc1EG030028 1.0kb upstream 1.0kb upstream 8132 true scaffold_6: 25463156-25471287 Theobroma cacao
Thecc1EG030028 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 25463156-25464155 Theobroma cacao
Thecc1EG030028 1.0kb downstream 1.0kb downstream 8132 true scaffold_6: 25464156-25472287 Theobroma cacao
Thecc1EG030028 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 25471288-25472287 Theobroma cacao
Thecc1EG030028 2.0kb upstream 2.0kb upstream 9132 true scaffold_6: 25462156-25471287 Theobroma cacao
Thecc1EG030028 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 25462156-25464155 Theobroma cacao
Thecc1EG030028 2.0kb downstream 2.0kb downstream 9132 true scaffold_6: 25464156-25473287 Theobroma cacao
Thecc1EG030028 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 25471288-25473287 Theobroma cacao
Thecc1EG030028 5.0kb upstream 5.0kb upstream 12132 true scaffold_6: 25459156-25471287 Theobroma cacao
Thecc1EG030028 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 25459156-25464155 Theobroma cacao
Thecc1EG030028 5.0kb downstream 5.0kb downstream 12132 true scaffold_6: 25464156-25476287 Theobroma cacao
Thecc1EG030028 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 25471288-25476287 Theobroma cacao
Thecc1EG030028 10.0kb upstream 10.0kb upstream 17132 true scaffold_6: 25454156-25471287 Theobroma cacao
Thecc1EG030028 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 25454156-25464155 Theobroma cacao
Thecc1EG030028 10.0kb downstream 10.0kb downstream 17132 true scaffold_6: 25464156-25481287 Theobroma cacao
Thecc1EG030028 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 25471288-25481287 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837958 5264 Brassicales-Malvales View MSA
124343429 5266 SBM View MSA
124242564 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain