Gene : Pavir.J498900 P. virgatum v4.1
Defline:  (1 of 3) K01887 - arginyl-tRNA synthetase (RARS, argS) Genomic Order:  2
Name:  ? Pavir.J498900 Secondary Identifier:  ? PAC:37616440
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J498900 0.5kb upstream 0.5kb upstream 7199 true scaffold_404: 23211-30409 Panicum virgatum
Pavir.J498900 0.5kb upstream 0.5kb upstream 500 false scaffold_404: 23211-23710 Panicum virgatum
Pavir.J498900 0.5kb downstream 0.5kb downstream 7199 true scaffold_404: 23711-30909 Panicum virgatum
Pavir.J498900 0.5kb downstream 0.5kb downstream 500 false scaffold_404: 30410-30909 Panicum virgatum
Pavir.J498900 1.0kb upstream 1.0kb upstream 7699 true scaffold_404: 22711-30409 Panicum virgatum
Pavir.J498900 1.0kb upstream 1.0kb upstream 1000 false scaffold_404: 22711-23710 Panicum virgatum
Pavir.J498900 1.0kb downstream 1.0kb downstream 7699 true scaffold_404: 23711-31409 Panicum virgatum
Pavir.J498900 1.0kb downstream 1.0kb downstream 1000 false scaffold_404: 30410-31409 Panicum virgatum
Pavir.J498900 2.0kb upstream 2.0kb upstream 8699 true scaffold_404: 21711-30409 Panicum virgatum
Pavir.J498900 2.0kb upstream 2.0kb upstream 2000 false scaffold_404: 21711-23710 Panicum virgatum
Pavir.J498900 2.0kb downstream 2.0kb downstream 8699 true scaffold_404: 23711-32409 Panicum virgatum
Pavir.J498900 2.0kb downstream 2.0kb downstream 2000 false scaffold_404: 30410-32409 Panicum virgatum
Pavir.J498900 5.0kb upstream 5.0kb upstream 11699 true scaffold_404: 18711-30409 Panicum virgatum
Pavir.J498900 5.0kb upstream 5.0kb upstream 5000 false scaffold_404: 18711-23710 Panicum virgatum
Pavir.J498900 5.0kb downstream 5.0kb downstream 11699 true scaffold_404: 23711-35409 Panicum virgatum
Pavir.J498900 5.0kb downstream 5.0kb downstream 5000 false scaffold_404: 30410-35409 Panicum virgatum
Pavir.J498900 10.0kb upstream 10.0kb upstream 16699 true scaffold_404: 13711-30409 Panicum virgatum
Pavir.J498900 10.0kb upstream 10.0kb upstream 10000 false scaffold_404: 13711-23710 Panicum virgatum
Pavir.J498900 10.0kb downstream 10.0kb downstream 14865 true scaffold_404: 23711-38575 Panicum virgatum
Pavir.J498900 10.0kb downstream 10.0kb downstream 8166 false scaffold_404: 30410-38575 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176353 5267 Panicoideae View MSA
124586091 5269 Grass View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain