Gene : Thecc1EG030383 T. cacao v1.1
Defline:  (1 of 8) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  2278
Name:  ? Thecc1EG030383 Secondary Identifier:  ? PAC:27437953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030383 0.5kb upstream 0.5kb upstream 2455 true scaffold_6: 26865673-26868127 Theobroma cacao
Thecc1EG030383 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26865673-26866172 Theobroma cacao
Thecc1EG030383 0.5kb downstream 0.5kb downstream 2455 true scaffold_6: 26866173-26868627 Theobroma cacao
Thecc1EG030383 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26868128-26868627 Theobroma cacao
Thecc1EG030383 1.0kb upstream 1.0kb upstream 2955 true scaffold_6: 26865173-26868127 Theobroma cacao
Thecc1EG030383 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26865173-26866172 Theobroma cacao
Thecc1EG030383 1.0kb downstream 1.0kb downstream 2955 true scaffold_6: 26866173-26869127 Theobroma cacao
Thecc1EG030383 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26868128-26869127 Theobroma cacao
Thecc1EG030383 2.0kb upstream 2.0kb upstream 3955 true scaffold_6: 26864173-26868127 Theobroma cacao
Thecc1EG030383 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26864173-26866172 Theobroma cacao
Thecc1EG030383 2.0kb downstream 2.0kb downstream 3955 true scaffold_6: 26866173-26870127 Theobroma cacao
Thecc1EG030383 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26868128-26870127 Theobroma cacao
Thecc1EG030383 5.0kb upstream 5.0kb upstream 6955 true scaffold_6: 26861173-26868127 Theobroma cacao
Thecc1EG030383 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26861173-26866172 Theobroma cacao
Thecc1EG030383 5.0kb downstream 5.0kb downstream 6955 true scaffold_6: 26866173-26873127 Theobroma cacao
Thecc1EG030383 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26868128-26873127 Theobroma cacao
Thecc1EG030383 10.0kb upstream 10.0kb upstream 11955 true scaffold_6: 26856173-26868127 Theobroma cacao
Thecc1EG030383 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26856173-26866172 Theobroma cacao
Thecc1EG030383 10.0kb downstream 10.0kb downstream 11955 true scaffold_6: 26866173-26878127 Theobroma cacao
Thecc1EG030383 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26868128-26878127 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027710 5273 Angiosperm View MSA
123820861 5264 Brassicales-Malvales Singleton cluster - no MSA
124317061 5266 SBM Singleton cluster - no MSA
124248239 5268 Malvidae View MSA
124072704 5270 Rosid View MSA
123628182 5271 Pentapetalae View MSA
122796344 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121349627 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain