Gene : Pavir.J481300 P. virgatum v4.1
Defline:  (1 of 4) K01869 - leucyl-tRNA synthetase (LARS, leuS) Genomic Order:  1
Name:  ? Pavir.J481300 Secondary Identifier:  ? PAC:37563378
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum TRNA-CHARGING-PWY Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J481300 0.5kb upstream 0.5kb upstream 5437 true scaffold_382: 1361-6797 Panicum virgatum
Pavir.J481300 0.5kb upstream 0.5kb upstream 500 false scaffold_382: 1361-1860 Panicum virgatum
Pavir.J481300 0.5kb downstream 0.5kb downstream 5437 true scaffold_382: 1861-7297 Panicum virgatum
Pavir.J481300 0.5kb downstream 0.5kb downstream 500 false scaffold_382: 6798-7297 Panicum virgatum
Pavir.J481300 1.0kb upstream 1.0kb upstream 5937 true scaffold_382: 861-6797 Panicum virgatum
Pavir.J481300 1.0kb upstream 1.0kb upstream 1000 false scaffold_382: 861-1860 Panicum virgatum
Pavir.J481300 1.0kb downstream 1.0kb downstream 5937 true scaffold_382: 1861-7797 Panicum virgatum
Pavir.J481300 1.0kb downstream 1.0kb downstream 1000 false scaffold_382: 6798-7797 Panicum virgatum
Pavir.J481300 2.0kb upstream 2.0kb upstream 6797 true scaffold_382: 1-6797 Panicum virgatum
Pavir.J481300 2.0kb upstream 2.0kb upstream 1860 false scaffold_382: 1-1860 Panicum virgatum
Pavir.J481300 2.0kb downstream 2.0kb downstream 6937 true scaffold_382: 1861-8797 Panicum virgatum
Pavir.J481300 2.0kb downstream 2.0kb downstream 2000 false scaffold_382: 6798-8797 Panicum virgatum
Pavir.J481300 5.0kb upstream 5.0kb upstream 6797 true scaffold_382: 1-6797 Panicum virgatum
Pavir.J481300 5.0kb upstream 5.0kb upstream 1860 false scaffold_382: 1-1860 Panicum virgatum
Pavir.J481300 5.0kb downstream 5.0kb downstream 9937 true scaffold_382: 1861-11797 Panicum virgatum
Pavir.J481300 5.0kb downstream 5.0kb downstream 5000 false scaffold_382: 6798-11797 Panicum virgatum
Pavir.J481300 10.0kb upstream 10.0kb upstream 6797 true scaffold_382: 1-6797 Panicum virgatum
Pavir.J481300 10.0kb upstream 10.0kb upstream 1860 false scaffold_382: 1-1860 Panicum virgatum
Pavir.J481300 10.0kb downstream 10.0kb downstream 14937 true scaffold_382: 1861-16797 Panicum virgatum
Pavir.J481300 10.0kb downstream 10.0kb downstream 10000 false scaffold_382: 6798-16797 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195247 5267 Panicoideae View MSA
124584532 5269 Grass View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain