Gene : Thecc1EG030350 T. cacao v1.1
Defline:  (1 of 1) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1) Genomic Order:  2248
Name:  ? Thecc1EG030350 Secondary Identifier:  ? PAC:27439909
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030350 0.5kb upstream 0.5kb upstream 10978 true scaffold_6: 26750280-26761257 Theobroma cacao
Thecc1EG030350 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26760758-26761257 Theobroma cacao
Thecc1EG030350 0.5kb downstream 0.5kb downstream 10978 true scaffold_6: 26749780-26760757 Theobroma cacao
Thecc1EG030350 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26749780-26750279 Theobroma cacao
Thecc1EG030350 1.0kb upstream 1.0kb upstream 11478 true scaffold_6: 26750280-26761757 Theobroma cacao
Thecc1EG030350 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26760758-26761757 Theobroma cacao
Thecc1EG030350 1.0kb downstream 1.0kb downstream 11478 true scaffold_6: 26749280-26760757 Theobroma cacao
Thecc1EG030350 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26749280-26750279 Theobroma cacao
Thecc1EG030350 2.0kb upstream 2.0kb upstream 12478 true scaffold_6: 26750280-26762757 Theobroma cacao
Thecc1EG030350 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26760758-26762757 Theobroma cacao
Thecc1EG030350 2.0kb downstream 2.0kb downstream 12478 true scaffold_6: 26748280-26760757 Theobroma cacao
Thecc1EG030350 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26748280-26750279 Theobroma cacao
Thecc1EG030350 5.0kb upstream 5.0kb upstream 15478 true scaffold_6: 26750280-26765757 Theobroma cacao
Thecc1EG030350 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26760758-26765757 Theobroma cacao
Thecc1EG030350 5.0kb downstream 5.0kb downstream 15478 true scaffold_6: 26745280-26760757 Theobroma cacao
Thecc1EG030350 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26745280-26750279 Theobroma cacao
Thecc1EG030350 10.0kb upstream 10.0kb upstream 20478 true scaffold_6: 26750280-26770757 Theobroma cacao
Thecc1EG030350 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26760758-26770757 Theobroma cacao
Thecc1EG030350 10.0kb downstream 10.0kb downstream 20478 true scaffold_6: 26740280-26760757 Theobroma cacao
Thecc1EG030350 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26740280-26750279 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836960 5264 Brassicales-Malvales View MSA
124341306 5266 SBM View MSA
124237328 5268 Malvidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain