Gene : Pavir.J437900 P. virgatum v4.1
Defline:  (1 of 5) K08099 - chlorophyllase (E3.1.1.14) Genomic Order:  1
Name:  ? Pavir.J437900 Secondary Identifier:  ? PAC:37608486
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY-5098 Panicum virgatum pathologic  
Pvirgatum PWY-6927 Panicum virgatum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J437900 0.5kb upstream 0.5kb upstream 2259 true scaffold_3342: 12562-14820 Panicum virgatum
Pavir.J437900 0.5kb upstream 0.5kb upstream 500 false scaffold_3342: 12562-13061 Panicum virgatum
Pavir.J437900 0.5kb downstream 0.5kb downstream 1762 true scaffold_3342: 13062-14823 Panicum virgatum
Pavir.J437900 0.5kb downstream 0.5kb downstream 3 false scaffold_3342: 14821-14823 Panicum virgatum
Pavir.J437900 1.0kb upstream 1.0kb upstream 2759 true scaffold_3342: 12062-14820 Panicum virgatum
Pavir.J437900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3342: 12062-13061 Panicum virgatum
Pavir.J437900 1.0kb downstream 1.0kb downstream 1762 true scaffold_3342: 13062-14823 Panicum virgatum
Pavir.J437900 1.0kb downstream 1.0kb downstream 3 false scaffold_3342: 14821-14823 Panicum virgatum
Pavir.J437900 2.0kb upstream 2.0kb upstream 3759 true scaffold_3342: 11062-14820 Panicum virgatum
Pavir.J437900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3342: 11062-13061 Panicum virgatum
Pavir.J437900 2.0kb downstream 2.0kb downstream 1762 true scaffold_3342: 13062-14823 Panicum virgatum
Pavir.J437900 2.0kb downstream 2.0kb downstream 3 false scaffold_3342: 14821-14823 Panicum virgatum
Pavir.J437900 5.0kb upstream 5.0kb upstream 6759 true scaffold_3342: 8062-14820 Panicum virgatum
Pavir.J437900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3342: 8062-13061 Panicum virgatum
Pavir.J437900 5.0kb downstream 5.0kb downstream 1762 true scaffold_3342: 13062-14823 Panicum virgatum
Pavir.J437900 5.0kb downstream 5.0kb downstream 3 false scaffold_3342: 14821-14823 Panicum virgatum
Pavir.J437900 10.0kb upstream 10.0kb upstream 11759 true scaffold_3342: 3062-14820 Panicum virgatum
Pavir.J437900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3342: 3062-13061 Panicum virgatum
Pavir.J437900 10.0kb downstream 10.0kb downstream 1762 true scaffold_3342: 13062-14823 Panicum virgatum
Pavir.J437900 10.0kb downstream 10.0kb downstream 3 false scaffold_3342: 14821-14823 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994831 5273 Angiosperm View MSA
122196661 5267 Panicoideae View MSA
124585797 5269 Grass View MSA
121265043 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain