Gene : Thecc1EG030340 T. cacao v1.1
Defline:  (1 of 2) K15131 - mediator of RNA polymerase II transcription subunit 11 (MED11) Genomic Order:  2241
Name:  ? Thecc1EG030340 Secondary Identifier:  ? PAC:27440743
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030340 0.5kb upstream 0.5kb upstream 1817 true scaffold_6: 26728530-26730346 Theobroma cacao
Thecc1EG030340 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26729847-26730346 Theobroma cacao
Thecc1EG030340 0.5kb downstream 0.5kb downstream 1817 true scaffold_6: 26728030-26729846 Theobroma cacao
Thecc1EG030340 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26728030-26728529 Theobroma cacao
Thecc1EG030340 1.0kb upstream 1.0kb upstream 2317 true scaffold_6: 26728530-26730846 Theobroma cacao
Thecc1EG030340 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26729847-26730846 Theobroma cacao
Thecc1EG030340 1.0kb downstream 1.0kb downstream 2317 true scaffold_6: 26727530-26729846 Theobroma cacao
Thecc1EG030340 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26727530-26728529 Theobroma cacao
Thecc1EG030340 2.0kb upstream 2.0kb upstream 3317 true scaffold_6: 26728530-26731846 Theobroma cacao
Thecc1EG030340 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26729847-26731846 Theobroma cacao
Thecc1EG030340 2.0kb downstream 2.0kb downstream 3317 true scaffold_6: 26726530-26729846 Theobroma cacao
Thecc1EG030340 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26726530-26728529 Theobroma cacao
Thecc1EG030340 5.0kb upstream 5.0kb upstream 6317 true scaffold_6: 26728530-26734846 Theobroma cacao
Thecc1EG030340 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26729847-26734846 Theobroma cacao
Thecc1EG030340 5.0kb downstream 5.0kb downstream 6317 true scaffold_6: 26723530-26729846 Theobroma cacao
Thecc1EG030340 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26723530-26728529 Theobroma cacao
Thecc1EG030340 10.0kb upstream 10.0kb upstream 11317 true scaffold_6: 26728530-26739846 Theobroma cacao
Thecc1EG030340 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26729847-26739846 Theobroma cacao
Thecc1EG030340 10.0kb downstream 10.0kb downstream 11317 true scaffold_6: 26718530-26729846 Theobroma cacao
Thecc1EG030340 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26718530-26728529 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831494 5264 Brassicales-Malvales View MSA
124342371 5266 SBM View MSA
124238984 5268 Malvidae View MSA
124071182 5270 Rosid View MSA
123753036 5271 Pentapetalae View MSA
122786862 5272 Eudicot View MSA
122043453 5273 Angiosperm View MSA
121349058 5274 Embryophyte View MSA
123381143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain