Gene : Pavir.1NG458400 P. virgatum v4.1
Defline:  (1 of 2) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  3962
Name:  ? Pavir.1NG458400 Secondary Identifier:  ? PAC:37612035
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvirgatum PWY0-662 Panicum virgatum pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.1NG458400 0.5kb upstream 0.5kb upstream 3262 true Chr01N: 84719744-84723005 Panicum virgatum
Pavir.1NG458400 0.5kb upstream 0.5kb upstream 500 false Chr01N: 84719744-84720243 Panicum virgatum
Pavir.1NG458400 0.5kb downstream 0.5kb downstream 3262 true Chr01N: 84720244-84723505 Panicum virgatum
Pavir.1NG458400 0.5kb downstream 0.5kb downstream 500 false Chr01N: 84723006-84723505 Panicum virgatum
Pavir.1NG458400 1.0kb upstream 1.0kb upstream 3762 true Chr01N: 84719244-84723005 Panicum virgatum
Pavir.1NG458400 1.0kb upstream 1.0kb upstream 1000 false Chr01N: 84719244-84720243 Panicum virgatum
Pavir.1NG458400 1.0kb downstream 1.0kb downstream 3762 true Chr01N: 84720244-84724005 Panicum virgatum
Pavir.1NG458400 1.0kb downstream 1.0kb downstream 1000 false Chr01N: 84723006-84724005 Panicum virgatum
Pavir.1NG458400 2.0kb upstream 2.0kb upstream 4762 true Chr01N: 84718244-84723005 Panicum virgatum
Pavir.1NG458400 2.0kb upstream 2.0kb upstream 2000 false Chr01N: 84718244-84720243 Panicum virgatum
Pavir.1NG458400 2.0kb downstream 2.0kb downstream 4762 true Chr01N: 84720244-84725005 Panicum virgatum
Pavir.1NG458400 2.0kb downstream 2.0kb downstream 2000 false Chr01N: 84723006-84725005 Panicum virgatum
Pavir.1NG458400 5.0kb upstream 5.0kb upstream 7762 true Chr01N: 84715244-84723005 Panicum virgatum
Pavir.1NG458400 5.0kb upstream 5.0kb upstream 5000 false Chr01N: 84715244-84720243 Panicum virgatum
Pavir.1NG458400 5.0kb downstream 5.0kb downstream 7762 true Chr01N: 84720244-84728005 Panicum virgatum
Pavir.1NG458400 5.0kb downstream 5.0kb downstream 5000 false Chr01N: 84723006-84728005 Panicum virgatum
Pavir.1NG458400 10.0kb upstream 10.0kb upstream 12762 true Chr01N: 84710244-84723005 Panicum virgatum
Pavir.1NG458400 10.0kb upstream 10.0kb upstream 10000 false Chr01N: 84710244-84720243 Panicum virgatum
Pavir.1NG458400 10.0kb downstream 10.0kb downstream 12762 true Chr01N: 84720244-84733005 Panicum virgatum
Pavir.1NG458400 10.0kb downstream 10.0kb downstream 10000 false Chr01N: 84723006-84733005 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196218 5267 Panicoideae View MSA
124573166 5269 Grass View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain