Gene : Thecc1EG030302 T. cacao v1.1
Defline:  (1 of 1) PTHR11850//PTHR11850:SF100 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // HOMEOBOX PROTEIN SHOOT MERISTEMLESS Genomic Order:  2206
Name:  ? Thecc1EG030302 Secondary Identifier:  ? PAC:27438993
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030302 0.5kb upstream 0.5kb upstream 6284 true scaffold_6: 26586532-26592815 Theobroma cacao
Thecc1EG030302 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26592316-26592815 Theobroma cacao
Thecc1EG030302 0.5kb downstream 0.5kb downstream 6284 true scaffold_6: 26586032-26592315 Theobroma cacao
Thecc1EG030302 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26586032-26586531 Theobroma cacao
Thecc1EG030302 1.0kb upstream 1.0kb upstream 6784 true scaffold_6: 26586532-26593315 Theobroma cacao
Thecc1EG030302 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26592316-26593315 Theobroma cacao
Thecc1EG030302 1.0kb downstream 1.0kb downstream 6784 true scaffold_6: 26585532-26592315 Theobroma cacao
Thecc1EG030302 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26585532-26586531 Theobroma cacao
Thecc1EG030302 2.0kb upstream 2.0kb upstream 7784 true scaffold_6: 26586532-26594315 Theobroma cacao
Thecc1EG030302 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26592316-26594315 Theobroma cacao
Thecc1EG030302 2.0kb downstream 2.0kb downstream 7784 true scaffold_6: 26584532-26592315 Theobroma cacao
Thecc1EG030302 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26584532-26586531 Theobroma cacao
Thecc1EG030302 5.0kb upstream 5.0kb upstream 10784 true scaffold_6: 26586532-26597315 Theobroma cacao
Thecc1EG030302 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26592316-26597315 Theobroma cacao
Thecc1EG030302 5.0kb downstream 5.0kb downstream 10784 true scaffold_6: 26581532-26592315 Theobroma cacao
Thecc1EG030302 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26581532-26586531 Theobroma cacao
Thecc1EG030302 10.0kb upstream 10.0kb upstream 15784 true scaffold_6: 26586532-26602315 Theobroma cacao
Thecc1EG030302 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26592316-26602315 Theobroma cacao
Thecc1EG030302 10.0kb downstream 10.0kb downstream 15784 true scaffold_6: 26576532-26592315 Theobroma cacao
Thecc1EG030302 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26576532-26586531 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831310 5264 Brassicales-Malvales View MSA
124339086 5266 SBM View MSA
124253570 5268 Malvidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain