Gene : Pavir.J579100 P. virgatum v4.1
Defline:  (1 of 23) PF00069//PF01453 - Protein kinase domain (Pkinase) // D-mannose binding lectin (B_lectin) Genomic Order:  1
Name:  ? Pavir.J579100 Secondary Identifier:  ? PAC:37644658
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pavir.J579100 0.5kb upstream 0.5kb upstream 3226 true scaffold_5318: 6742-9967 Panicum virgatum
Pavir.J579100 0.5kb upstream 0.5kb upstream 500 false scaffold_5318: 6742-7241 Panicum virgatum
Pavir.J579100 0.5kb downstream 0.5kb downstream 3226 true scaffold_5318: 7242-10467 Panicum virgatum
Pavir.J579100 0.5kb downstream 0.5kb downstream 500 false scaffold_5318: 9968-10467 Panicum virgatum
Pavir.J579100 1.0kb upstream 1.0kb upstream 3726 true scaffold_5318: 6242-9967 Panicum virgatum
Pavir.J579100 1.0kb upstream 1.0kb upstream 1000 false scaffold_5318: 6242-7241 Panicum virgatum
Pavir.J579100 1.0kb downstream 1.0kb downstream 3536 true scaffold_5318: 7242-10777 Panicum virgatum
Pavir.J579100 1.0kb downstream 1.0kb downstream 810 false scaffold_5318: 9968-10777 Panicum virgatum
Pavir.J579100 2.0kb upstream 2.0kb upstream 4726 true scaffold_5318: 5242-9967 Panicum virgatum
Pavir.J579100 2.0kb upstream 2.0kb upstream 2000 false scaffold_5318: 5242-7241 Panicum virgatum
Pavir.J579100 2.0kb downstream 2.0kb downstream 3536 true scaffold_5318: 7242-10777 Panicum virgatum
Pavir.J579100 2.0kb downstream 2.0kb downstream 810 false scaffold_5318: 9968-10777 Panicum virgatum
Pavir.J579100 5.0kb upstream 5.0kb upstream 7726 true scaffold_5318: 2242-9967 Panicum virgatum
Pavir.J579100 5.0kb upstream 5.0kb upstream 5000 false scaffold_5318: 2242-7241 Panicum virgatum
Pavir.J579100 5.0kb downstream 5.0kb downstream 3536 true scaffold_5318: 7242-10777 Panicum virgatum
Pavir.J579100 5.0kb downstream 5.0kb downstream 810 false scaffold_5318: 9968-10777 Panicum virgatum
Pavir.J579100 10.0kb upstream 10.0kb upstream 9967 true scaffold_5318: 1-9967 Panicum virgatum
Pavir.J579100 10.0kb upstream 10.0kb upstream 7241 false scaffold_5318: 1-7241 Panicum virgatum
Pavir.J579100 10.0kb downstream 10.0kb downstream 3536 true scaffold_5318: 7242-10777 Panicum virgatum
Pavir.J579100 10.0kb downstream 10.0kb downstream 810 false scaffold_5318: 9968-10777 Panicum virgatum

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122097937 5267 Panicoideae Singleton cluster - no MSA
124583539 5269 Grass View MSA
122046776 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain