Gene : Thecc1EG030256 T. cacao v1.1
Defline:  (1 of 1) K00605 - aminomethyltransferase (gcvT, AMT) Genomic Order:  2162
Name:  ? Thecc1EG030256 Secondary Identifier:  ? PAC:27438677
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYCLEAV-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030256 0.5kb upstream 0.5kb upstream 3555 true scaffold_6: 26402214-26405768 Theobroma cacao
Thecc1EG030256 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26405269-26405768 Theobroma cacao
Thecc1EG030256 0.5kb downstream 0.5kb downstream 3555 true scaffold_6: 26401714-26405268 Theobroma cacao
Thecc1EG030256 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26401714-26402213 Theobroma cacao
Thecc1EG030256 1.0kb upstream 1.0kb upstream 4055 true scaffold_6: 26402214-26406268 Theobroma cacao
Thecc1EG030256 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26405269-26406268 Theobroma cacao
Thecc1EG030256 1.0kb downstream 1.0kb downstream 4055 true scaffold_6: 26401214-26405268 Theobroma cacao
Thecc1EG030256 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26401214-26402213 Theobroma cacao
Thecc1EG030256 2.0kb upstream 2.0kb upstream 5055 true scaffold_6: 26402214-26407268 Theobroma cacao
Thecc1EG030256 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26405269-26407268 Theobroma cacao
Thecc1EG030256 2.0kb downstream 2.0kb downstream 5055 true scaffold_6: 26400214-26405268 Theobroma cacao
Thecc1EG030256 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26400214-26402213 Theobroma cacao
Thecc1EG030256 5.0kb upstream 5.0kb upstream 8055 true scaffold_6: 26402214-26410268 Theobroma cacao
Thecc1EG030256 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26405269-26410268 Theobroma cacao
Thecc1EG030256 5.0kb downstream 5.0kb downstream 8055 true scaffold_6: 26397214-26405268 Theobroma cacao
Thecc1EG030256 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26397214-26402213 Theobroma cacao
Thecc1EG030256 10.0kb upstream 10.0kb upstream 13055 true scaffold_6: 26402214-26415268 Theobroma cacao
Thecc1EG030256 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26405269-26415268 Theobroma cacao
Thecc1EG030256 10.0kb downstream 10.0kb downstream 13055 true scaffold_6: 26392214-26405268 Theobroma cacao
Thecc1EG030256 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26392214-26402213 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834840 5264 Brassicales-Malvales View MSA
124337156 5266 SBM View MSA
124251126 5268 Malvidae View MSA
124063348 5270 Rosid View MSA
123743205 5271 Pentapetalae View MSA
122791059 5272 Eudicot View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain