Gene : Thecc1EG030254 T. cacao v1.1

Defline:  F19K23.17 protein (74%P) Genomic Order:  2161
Name:  ? Thecc1EG030254 Secondary Identifier:  ? PAC:27440318

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG030254 0.5kb upstream 0.5kb upstream 2693 true scaffold_6: 26399619-26402311 Theobroma cacao
Thecc1EG030254 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 26401812-26402311 Theobroma cacao
Thecc1EG030254 0.5kb downstream 0.5kb downstream 2693 true scaffold_6: 26399119-26401811 Theobroma cacao
Thecc1EG030254 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 26399119-26399618 Theobroma cacao
Thecc1EG030254 1.0kb upstream 1.0kb upstream 3193 true scaffold_6: 26399619-26402811 Theobroma cacao
Thecc1EG030254 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 26401812-26402811 Theobroma cacao
Thecc1EG030254 1.0kb downstream 1.0kb downstream 3193 true scaffold_6: 26398619-26401811 Theobroma cacao
Thecc1EG030254 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 26398619-26399618 Theobroma cacao
Thecc1EG030254 2.0kb upstream 2.0kb upstream 4193 true scaffold_6: 26399619-26403811 Theobroma cacao
Thecc1EG030254 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 26401812-26403811 Theobroma cacao
Thecc1EG030254 2.0kb downstream 2.0kb downstream 4193 true scaffold_6: 26397619-26401811 Theobroma cacao
Thecc1EG030254 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 26397619-26399618 Theobroma cacao
Thecc1EG030254 5.0kb upstream 5.0kb upstream 7193 true scaffold_6: 26399619-26406811 Theobroma cacao
Thecc1EG030254 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 26401812-26406811 Theobroma cacao
Thecc1EG030254 5.0kb downstream 5.0kb downstream 7193 true scaffold_6: 26394619-26401811 Theobroma cacao
Thecc1EG030254 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 26394619-26399618 Theobroma cacao
Thecc1EG030254 10.0kb upstream 10.0kb upstream 12193 true scaffold_6: 26399619-26411811 Theobroma cacao
Thecc1EG030254 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 26401812-26411811 Theobroma cacao
Thecc1EG030254 10.0kb downstream 10.0kb downstream 12193 true scaffold_6: 26389619-26401811 Theobroma cacao
Thecc1EG030254 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 26389619-26399618 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041149 5273 Angiosperm View MSA
123831340 5264 Brassicales-Malvales View MSA
124344351 5266 SBM View MSA
124239579 5268 Malvidae View MSA
124062816 5270 Rosid View MSA
123736847 5271 Pentapetalae View MSA
122795853 5272 Eudicot View MSA
121344307 5274 Embryophyte View MSA
123426135 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain